Protein–RNA interactions for Protein: Q99M51

Nck1, Cytoplasmic protein NCK1, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nck1Q99M51 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Nck1Q99M51 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Nck1Q99M51 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Nck1Q99M51 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nck1Q99M51 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nck1Q99M51 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nck1Q99M51 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.06■□□□□ 0.48
Nck1Q99M51 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Nck1Q99M51 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Nck1Q99M51 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nck1Q99M51 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Nck1Q99M51 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nck1Q99M51 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nck1Q99M51 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Nck1Q99M51 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.05■□□□□ 0.48
Nck1Q99M51 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.05■□□□□ 0.48
Nck1Q99M51 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.05■□□□□ 0.48
Nck1Q99M51 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nck1Q99M51 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nck1Q99M51 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nck1Q99M51 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.05■□□□□ 0.48
Nck1Q99M51 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nck1Q99M51 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nck1Q99M51 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nck1Q99M51 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.05■□□□□ 0.48
Nck1Q99M51 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nck1Q99M51 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nck1Q99M51 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nck1Q99M51 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nck1Q99M51 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Nck1Q99M51 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.04■□□□□ 0.48
Nck1Q99M51 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.04■□□□□ 0.48
Nck1Q99M51 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nck1Q99M51 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nck1Q99M51 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nck1Q99M51 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nck1Q99M51 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.04■□□□□ 0.48
Nck1Q99M51 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nck1Q99M51 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Nck1Q99M51 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nck1Q99M51 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nck1Q99M51 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.04■□□□□ 0.48
Nck1Q99M51 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nck1Q99M51 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nck1Q99M51 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nck1Q99M51 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nck1Q99M51 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nck1Q99M51 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nck1Q99M51 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nck1Q99M51 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nck1Q99M51 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nck1Q99M51 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nck1Q99M51 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Nck1Q99M51 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Nck1Q99M51 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nck1Q99M51 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nck1Q99M51 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nck1Q99M51 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nck1Q99M51 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nck1Q99M51 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Nck1Q99M51 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nck1Q99M51 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.02■□□□□ 0.48
Nck1Q99M51 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.02■□□□□ 0.48
Nck1Q99M51 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nck1Q99M51 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nck1Q99M51 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Nck1Q99M51 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nck1Q99M51 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nck1Q99M51 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Nck1Q99M51 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.02■□□□□ 0.47
Nck1Q99M51 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Nck1Q99M51 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.47
Nck1Q99M51 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Nck1Q99M51 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Nck1Q99M51 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Nck1Q99M51 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nck1Q99M51 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.01■□□□□ 0.47
Nck1Q99M51 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nck1Q99M51 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nck1Q99M51 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nck1Q99M51 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Nck1Q99M51 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
Nck1Q99M51 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18■□□□□ 0.47
Nck1Q99M51 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nck1Q99M51 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18■□□□□ 0.47
Nck1Q99M51 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18■□□□□ 0.47
Nck1Q99M51 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nck1Q99M51 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Nck1Q99M51 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nck1Q99M51 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nck1Q99M51 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nck1Q99M51 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nck1Q99M51 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nck1Q99M51 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nck1Q99M51 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Nck1Q99M51 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Nck1Q99M51 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Nck1Q99M51 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nck1Q99M51 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nck1Q99M51 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms