Protein–RNA interactions for Protein: Q99LI2

Clcc1, Chloride channel CLIC-like protein 1, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcc1Q99LI2 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Clcc1Q99LI2 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Clcc1Q99LI2 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Clcc1Q99LI2 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Clcc1Q99LI2 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.74■□□□□ 0.59
Clcc1Q99LI2 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Clcc1Q99LI2 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Clcc1Q99LI2 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Clcc1Q99LI2 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Clcc1Q99LI2 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Clcc1Q99LI2 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Clcc1Q99LI2 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Clcc1Q99LI2 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Clcc1Q99LI2 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Clcc1Q99LI2 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Clcc1Q99LI2 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Clcc1Q99LI2 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Clcc1Q99LI2 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Clcc1Q99LI2 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Clcc1Q99LI2 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Clcc1Q99LI2 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Clcc1Q99LI2 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.73■□□□□ 0.59
Clcc1Q99LI2 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.73■□□□□ 0.59
Clcc1Q99LI2 Gm6365-201ENSMUST00000054711 744 ntBASIC18.73■□□□□ 0.59
Clcc1Q99LI2 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Clcc1Q99LI2 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
Clcc1Q99LI2 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Clcc1Q99LI2 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Clcc1Q99LI2 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Clcc1Q99LI2 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clcc1Q99LI2 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clcc1Q99LI2 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clcc1Q99LI2 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clcc1Q99LI2 Gm7860-201ENSMUST00000121190 879 ntBASIC18.72■□□□□ 0.59
Clcc1Q99LI2 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Clcc1Q99LI2 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clcc1Q99LI2 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clcc1Q99LI2 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clcc1Q99LI2 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.72■□□□□ 0.59
Clcc1Q99LI2 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clcc1Q99LI2 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Clcc1Q99LI2 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Clcc1Q99LI2 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Clcc1Q99LI2 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Clcc1Q99LI2 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Clcc1Q99LI2 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.71■□□□□ 0.59
Clcc1Q99LI2 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
Clcc1Q99LI2 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Clcc1Q99LI2 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Clcc1Q99LI2 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Clcc1Q99LI2 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Clcc1Q99LI2 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Clcc1Q99LI2 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Clcc1Q99LI2 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Clcc1Q99LI2 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clcc1Q99LI2 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Clcc1Q99LI2 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.7■□□□□ 0.58
Clcc1Q99LI2 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.7■□□□□ 0.58
Clcc1Q99LI2 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.7■□□□□ 0.58
Clcc1Q99LI2 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clcc1Q99LI2 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clcc1Q99LI2 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clcc1Q99LI2 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clcc1Q99LI2 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clcc1Q99LI2 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clcc1Q99LI2 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Clcc1Q99LI2 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clcc1Q99LI2 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clcc1Q99LI2 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clcc1Q99LI2 Gm13534-201ENSMUST00000121169 513 ntBASIC18.69■□□□□ 0.58
Clcc1Q99LI2 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Clcc1Q99LI2 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clcc1Q99LI2 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clcc1Q99LI2 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Clcc1Q99LI2 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clcc1Q99LI2 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clcc1Q99LI2 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clcc1Q99LI2 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Clcc1Q99LI2 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clcc1Q99LI2 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clcc1Q99LI2 Golph3-202ENSMUST00000226517 2359 ntBASIC18.68■□□□□ 0.58
Clcc1Q99LI2 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clcc1Q99LI2 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.68■□□□□ 0.58
Clcc1Q99LI2 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.68■□□□□ 0.58
Clcc1Q99LI2 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.68■□□□□ 0.58
Clcc1Q99LI2 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clcc1Q99LI2 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clcc1Q99LI2 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clcc1Q99LI2 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clcc1Q99LI2 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
Clcc1Q99LI2 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
Clcc1Q99LI2 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Clcc1Q99LI2 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.67■□□□□ 0.58
Clcc1Q99LI2 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clcc1Q99LI2 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Clcc1Q99LI2 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clcc1Q99LI2 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clcc1Q99LI2 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Clcc1Q99LI2 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Clcc1Q99LI2 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms