Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Cdk9Q99J95 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cdk9Q99J95 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cdk9Q99J95 Gm7417-201ENSMUST00000192950 473 ntBASIC19.06■□□□□ 0.64
Cdk9Q99J95 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.06■□□□□ 0.64
Cdk9Q99J95 Gm9870-201ENSMUST00000063874 645 ntBASIC19.06■□□□□ 0.64
Cdk9Q99J95 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC19.06■□□□□ 0.64
Cdk9Q99J95 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cdk9Q99J95 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cdk9Q99J95 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cdk9Q99J95 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.05■□□□□ 0.64
Cdk9Q99J95 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cdk9Q99J95 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Cdk9Q99J95 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Cdk9Q99J95 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cdk9Q99J95 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.05■□□□□ 0.64
Cdk9Q99J95 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cdk9Q99J95 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cdk9Q99J95 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cdk9Q99J95 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cdk9Q99J95 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Cdk9Q99J95 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cdk9Q99J95 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.04■□□□□ 0.64
Cdk9Q99J95 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Cdk9Q99J95 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cdk9Q99J95 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
Cdk9Q99J95 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cdk9Q99J95 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cdk9Q99J95 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Cdk9Q99J95 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cdk9Q99J95 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cdk9Q99J95 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cdk9Q99J95 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cdk9Q99J95 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdk9Q99J95 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdk9Q99J95 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cdk9Q99J95 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.03■□□□□ 0.64
Cdk9Q99J95 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdk9Q99J95 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cdk9Q99J95 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdk9Q99J95 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdk9Q99J95 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Cdk9Q99J95 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cdk9Q99J95 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cdk9Q99J95 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cdk9Q99J95 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.02■□□□□ 0.64
Cdk9Q99J95 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.02■□□□□ 0.64
Cdk9Q99J95 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cdk9Q99J95 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.02■□□□□ 0.64
Cdk9Q99J95 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cdk9Q99J95 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cdk9Q99J95 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Cdk9Q99J95 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.02■□□□□ 0.64
Cdk9Q99J95 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cdk9Q99J95 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cdk9Q99J95 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cdk9Q99J95 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Cdk9Q99J95 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cdk9Q99J95 AA386476-201ENSMUST00000098781 1665 ntBASIC19.01■□□□□ 0.63
Cdk9Q99J95 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cdk9Q99J95 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cdk9Q99J95 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
Cdk9Q99J95 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cdk9Q99J95 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cdk9Q99J95 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.01■□□□□ 0.63
Cdk9Q99J95 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.01■□□□□ 0.63
Cdk9Q99J95 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cdk9Q99J95 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Cdk9Q99J95 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Cdk9Q99J95 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cdk9Q99J95 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cdk9Q99J95 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Cdk9Q99J95 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Cdk9Q99J95 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cdk9Q99J95 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cdk9Q99J95 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Cdk9Q99J95 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cdk9Q99J95 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Cdk9Q99J95 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cdk9Q99J95 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cdk9Q99J95 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Cdk9Q99J95 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cdk9Q99J95 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19■□□□□ 0.63
Cdk9Q99J95 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cdk9Q99J95 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cdk9Q99J95 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cdk9Q99J95 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Cdk9Q99J95 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cdk9Q99J95 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cdk9Q99J95 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cdk9Q99J95 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cdk9Q99J95 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cdk9Q99J95 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cdk9Q99J95 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cdk9Q99J95 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cdk9Q99J95 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cdk9Q99J95 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cdk9Q99J95 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.99■□□□□ 0.63
Cdk9Q99J95 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cdk9Q99J95 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms