Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC27.71■■■□□ 2.03
ZNF428Q96B54 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC27.71■■■□□ 2.03
ZNF428Q96B54 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
ZNF428Q96B54 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC27.71■■■□□ 2.03
ZNF428Q96B54 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
ZNF428Q96B54 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC27.71■■■□□ 2.03
ZNF428Q96B54 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC27.71■■■□□ 2.03
ZNF428Q96B54 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
ZNF428Q96B54 C11orf96-202ENST00000528572 1834 ntBASIC27.7■■■□□ 2.02
ZNF428Q96B54 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC27.7■■■□□ 2.02
ZNF428Q96B54 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC27.7■■■□□ 2.02
ZNF428Q96B54 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
ZNF428Q96B54 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC27.7■■■□□ 2.02
ZNF428Q96B54 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC27.7■■■□□ 2.02
ZNF428Q96B54 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC27.7■■■□□ 2.02
ZNF428Q96B54 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
ZNF428Q96B54 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
ZNF428Q96B54 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
ZNF428Q96B54 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
ZNF428Q96B54 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
ZNF428Q96B54 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC27.69■■■□□ 2.02
ZNF428Q96B54 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
ZNF428Q96B54 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
ZNF428Q96B54 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
ZNF428Q96B54 GXYLT1P2-201ENST00000433312 1230 ntBASIC27.69■■■□□ 2.02
ZNF428Q96B54 AC090192.1-201ENST00000517740 490 ntBASIC27.69■■■□□ 2.02
ZNF428Q96B54 TERF1P2-201ENST00000583350 1212 ntBASIC27.69■■■□□ 2.02
ZNF428Q96B54 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC27.69■■■□□ 2.02
ZNF428Q96B54 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
ZNF428Q96B54 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
ZNF428Q96B54 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC27.69■■■□□ 2.02
ZNF428Q96B54 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
ZNF428Q96B54 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
ZNF428Q96B54 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC27.69■■■□□ 2.02
ZNF428Q96B54 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC27.69■■■□□ 2.02
ZNF428Q96B54 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
ZNF428Q96B54 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC27.68■■■□□ 2.02
ZNF428Q96B54 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
ZNF428Q96B54 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
ZNF428Q96B54 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
ZNF428Q96B54 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
ZNF428Q96B54 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC27.68■■■□□ 2.02
ZNF428Q96B54 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC27.68■■■□□ 2.02
ZNF428Q96B54 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
ZNF428Q96B54 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
ZNF428Q96B54 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC27.68■■■□□ 2.02
ZNF428Q96B54 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC27.68■■■□□ 2.02
ZNF428Q96B54 AL137784.2-201ENST00000607332 1000 ntBASIC27.68■■■□□ 2.02
ZNF428Q96B54 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
ZNF428Q96B54 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
ZNF428Q96B54 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC27.68■■■□□ 2.02
ZNF428Q96B54 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC27.68■■■□□ 2.02
ZNF428Q96B54 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
ZNF428Q96B54 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC27.68■■■□□ 2.02
ZNF428Q96B54 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC27.68■■■□□ 2.02
ZNF428Q96B54 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC27.67■■■□□ 2.02
ZNF428Q96B54 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC27.67■■■□□ 2.02
ZNF428Q96B54 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
ZNF428Q96B54 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC27.67■■■□□ 2.02
ZNF428Q96B54 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC27.67■■■□□ 2.02
ZNF428Q96B54 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
ZNF428Q96B54 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
ZNF428Q96B54 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC27.67■■■□□ 2.02
ZNF428Q96B54 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
ZNF428Q96B54 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC27.67■■■□□ 2.02
ZNF428Q96B54 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
ZNF428Q96B54 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC27.67■■■□□ 2.02
ZNF428Q96B54 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
ZNF428Q96B54 MPST-204ENST00000404393 1329 ntTSL 5 BASIC27.67■■■□□ 2.02
ZNF428Q96B54 LINC02228-203ENST00000641970 1355 ntBASIC27.66■■■□□ 2.02
ZNF428Q96B54 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
ZNF428Q96B54 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC27.66■■■□□ 2.02
ZNF428Q96B54 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC27.66■■■□□ 2.02
ZNF428Q96B54 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC27.66■■■□□ 2.02
ZNF428Q96B54 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC27.66■■■□□ 2.02
ZNF428Q96B54 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC27.66■■■□□ 2.02
ZNF428Q96B54 RARRES2P11-201ENST00000635158 484 ntBASIC27.66■■■□□ 2.02
ZNF428Q96B54 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
ZNF428Q96B54 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC27.66■■■□□ 2.02
ZNF428Q96B54 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
ZNF428Q96B54 AP004607.7-201ENST00000527152 1677 ntBASIC27.65■■■□□ 2.02
ZNF428Q96B54 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC27.65■■■□□ 2.02
ZNF428Q96B54 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC27.65■■■□□ 2.02
ZNF428Q96B54 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
ZNF428Q96B54 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC27.65■■■□□ 2.02
ZNF428Q96B54 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC27.65■■■□□ 2.02
ZNF428Q96B54 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
ZNF428Q96B54 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC27.65■■■□□ 2.02
ZNF428Q96B54 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC27.65■■■□□ 2.02
ZNF428Q96B54 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
ZNF428Q96B54 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC27.65■■■□□ 2.02
ZNF428Q96B54 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC27.64■■■□□ 2.02
ZNF428Q96B54 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC27.64■■■□□ 2.02
ZNF428Q96B54 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC27.64■■■□□ 2.02
ZNF428Q96B54 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC27.64■■■□□ 2.02
ZNF428Q96B54 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
ZNF428Q96B54 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC27.64■■■□□ 2.02
ZNF428Q96B54 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC27.64■■■□□ 2.02
ZNF428Q96B54 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC27.64■■■□□ 2.02
ZNF428Q96B54 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms