Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC21.8■■□□□ 1.08
Smc1bQ920F6 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Smc1bQ920F6 Gm5112-201ENSMUST00000204407 2368 ntBASIC21.8■■□□□ 1.08
Smc1bQ920F6 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smc1bQ920F6 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC21.79■■□□□ 1.08
Smc1bQ920F6 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smc1bQ920F6 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smc1bQ920F6 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC21.79■■□□□ 1.08
Smc1bQ920F6 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smc1bQ920F6 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC21.79■■□□□ 1.08
Smc1bQ920F6 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC21.79■■□□□ 1.08
Smc1bQ920F6 AC135637.1-201ENSMUST00000227750 365 ntBASIC21.79■■□□□ 1.08
Smc1bQ920F6 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smc1bQ920F6 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Smc1bQ920F6 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smc1bQ920F6 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smc1bQ920F6 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smc1bQ920F6 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Smc1bQ920F6 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smc1bQ920F6 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smc1bQ920F6 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smc1bQ920F6 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC21.78■■□□□ 1.08
Smc1bQ920F6 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smc1bQ920F6 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Smc1bQ920F6 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Smc1bQ920F6 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Smc1bQ920F6 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Smc1bQ920F6 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Smc1bQ920F6 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC21.78■■□□□ 1.08
Smc1bQ920F6 Gm6365-201ENSMUST00000054711 744 ntBASIC21.78■■□□□ 1.08
Smc1bQ920F6 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Smc1bQ920F6 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smc1bQ920F6 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smc1bQ920F6 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
Smc1bQ920F6 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Smc1bQ920F6 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Smc1bQ920F6 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Smc1bQ920F6 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Smc1bQ920F6 Gm7977-201ENSMUST00000193787 748 ntBASIC21.77■■□□□ 1.08
Smc1bQ920F6 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Smc1bQ920F6 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Smc1bQ920F6 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smc1bQ920F6 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Smc1bQ920F6 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smc1bQ920F6 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Smc1bQ920F6 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smc1bQ920F6 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smc1bQ920F6 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Smc1bQ920F6 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smc1bQ920F6 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC21.76■■□□□ 1.07
Smc1bQ920F6 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smc1bQ920F6 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smc1bQ920F6 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC21.75■■□□□ 1.07
Smc1bQ920F6 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC21.75■■□□□ 1.07
Smc1bQ920F6 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smc1bQ920F6 Gm37035-201ENSMUST00000194809 2148 ntBASIC21.75■■□□□ 1.07
Smc1bQ920F6 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Smc1bQ920F6 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smc1bQ920F6 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Smc1bQ920F6 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Smc1bQ920F6 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
Smc1bQ920F6 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smc1bQ920F6 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Smc1bQ920F6 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smc1bQ920F6 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
Smc1bQ920F6 Gm13146-201ENSMUST00000118508 780 ntBASIC21.74■■□□□ 1.07
Smc1bQ920F6 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC21.74■■□□□ 1.07
Smc1bQ920F6 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC21.74■■□□□ 1.07
Smc1bQ920F6 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smc1bQ920F6 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smc1bQ920F6 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smc1bQ920F6 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC21.74■■□□□ 1.07
Smc1bQ920F6 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smc1bQ920F6 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Smc1bQ920F6 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Smc1bQ920F6 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Smc1bQ920F6 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smc1bQ920F6 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smc1bQ920F6 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smc1bQ920F6 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smc1bQ920F6 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smc1bQ920F6 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smc1bQ920F6 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Smc1bQ920F6 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC21.72■■□□□ 1.07
Smc1bQ920F6 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Smc1bQ920F6 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Smc1bQ920F6 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC21.72■■□□□ 1.07
Smc1bQ920F6 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC21.72■■□□□ 1.07
Smc1bQ920F6 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Smc1bQ920F6 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Smc1bQ920F6 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Smc1bQ920F6 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.71■■□□□ 1.07
Smc1bQ920F6 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smc1bQ920F6 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.71■■□□□ 1.07
Smc1bQ920F6 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC21.71■■□□□ 1.07
Smc1bQ920F6 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
Smc1bQ920F6 Mir6982-201ENSMUST00000184354 68 ntBASIC21.71■■□□□ 1.07
Smc1bQ920F6 Gm37856-201ENSMUST00000191634 999 ntBASIC21.71■■□□□ 1.07
Smc1bQ920F6 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smc1bQ920F6 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms