Protein–RNA interactions for Protein: Q91Y21

Pcdha1, Protocadherin alpha 1, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1Q91Y21 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdha1Q91Y21 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdha1Q91Y21 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdha1Q91Y21 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdha1Q91Y21 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdha1Q91Y21 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdha1Q91Y21 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Pcdha1Q91Y21 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdha1Q91Y21 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdha1Q91Y21 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.77■□□□□ 0.76
Pcdha1Q91Y21 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdha1Q91Y21 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdha1Q91Y21 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
Pcdha1Q91Y21 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdha1Q91Y21 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.76■□□□□ 0.75
Pcdha1Q91Y21 Mir5133-201ENSMUST00000174955 77 ntBASIC19.76■□□□□ 0.75
Pcdha1Q91Y21 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.76■□□□□ 0.75
Pcdha1Q91Y21 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Pcdha1Q91Y21 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdha1Q91Y21 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdha1Q91Y21 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdha1Q91Y21 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdha1Q91Y21 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdha1Q91Y21 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdha1Q91Y21 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdha1Q91Y21 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdha1Q91Y21 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdha1Q91Y21 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdha1Q91Y21 Gm7860-201ENSMUST00000121190 879 ntBASIC19.75■□□□□ 0.75
Pcdha1Q91Y21 Gm27011-201ENSMUST00000182352 972 ntBASIC19.75■□□□□ 0.75
Pcdha1Q91Y21 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.75■□□□□ 0.75
Pcdha1Q91Y21 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Pcdha1Q91Y21 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdha1Q91Y21 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Pcdha1Q91Y21 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.75■□□□□ 0.75
Pcdha1Q91Y21 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdha1Q91Y21 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdha1Q91Y21 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdha1Q91Y21 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.74■□□□□ 0.75
Pcdha1Q91Y21 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.74■□□□□ 0.75
Pcdha1Q91Y21 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdha1Q91Y21 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdha1Q91Y21 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdha1Q91Y21 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Pcdha1Q91Y21 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdha1Q91Y21 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdha1Q91Y21 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdha1Q91Y21 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdha1Q91Y21 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdha1Q91Y21 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdha1Q91Y21 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdha1Q91Y21 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdha1Q91Y21 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdha1Q91Y21 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdha1Q91Y21 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.73■□□□□ 0.75
Pcdha1Q91Y21 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdha1Q91Y21 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdha1Q91Y21 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.73■□□□□ 0.75
Pcdha1Q91Y21 Gm6420-201ENSMUST00000193885 723 ntBASIC19.73■□□□□ 0.75
Pcdha1Q91Y21 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.73■□□□□ 0.75
Pcdha1Q91Y21 AC112142.1-201ENSMUST00000228796 918 ntBASIC19.73■□□□□ 0.75
Pcdha1Q91Y21 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.73■□□□□ 0.75
Pcdha1Q91Y21 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Pcdha1Q91Y21 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdha1Q91Y21 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
Pcdha1Q91Y21 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdha1Q91Y21 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Pcdha1Q91Y21 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdha1Q91Y21 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdha1Q91Y21 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdha1Q91Y21 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdha1Q91Y21 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdha1Q91Y21 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.72■□□□□ 0.75
Pcdha1Q91Y21 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdha1Q91Y21 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdha1Q91Y21 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Pcdha1Q91Y21 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
Pcdha1Q91Y21 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Pcdha1Q91Y21 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
Pcdha1Q91Y21 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdha1Q91Y21 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdha1Q91Y21 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdha1Q91Y21 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdha1Q91Y21 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdha1Q91Y21 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdha1Q91Y21 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Pcdha1Q91Y21 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdha1Q91Y21 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Pcdha1Q91Y21 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Pcdha1Q91Y21 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.71■□□□□ 0.75
Pcdha1Q91Y21 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.71■□□□□ 0.75
Pcdha1Q91Y21 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdha1Q91Y21 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Pcdha1Q91Y21 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdha1Q91Y21 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Pcdha1Q91Y21 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdha1Q91Y21 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdha1Q91Y21 Gm7290-201ENSMUST00000104990 617 ntBASIC19.7■□□□□ 0.74
Pcdha1Q91Y21 Gm12918-201ENSMUST00000120234 636 ntBASIC19.7■□□□□ 0.74
Pcdha1Q91Y21 Gm15710-201ENSMUST00000121821 636 ntBASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms