Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb3Q91XZ7 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.88■□□□□ 0.61
Pcdhb3Q91XZ7 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb3Q91XZ7 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Pcdhb3Q91XZ7 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Pcdhb3Q91XZ7 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhb3Q91XZ7 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Pcdhb3Q91XZ7 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb3Q91XZ7 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb3Q91XZ7 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.87■□□□□ 0.61
Pcdhb3Q91XZ7 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.87■□□□□ 0.61
Pcdhb3Q91XZ7 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.87■□□□□ 0.61
Pcdhb3Q91XZ7 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.87■□□□□ 0.61
Pcdhb3Q91XZ7 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb3Q91XZ7 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb3Q91XZ7 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhb3Q91XZ7 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Pcdhb3Q91XZ7 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb3Q91XZ7 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb3Q91XZ7 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.86■□□□□ 0.61
Pcdhb3Q91XZ7 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb3Q91XZ7 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Pcdhb3Q91XZ7 Gm9870-201ENSMUST00000063874 645 ntBASIC18.86■□□□□ 0.61
Pcdhb3Q91XZ7 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb3Q91XZ7 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.86■□□□□ 0.61
Pcdhb3Q91XZ7 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.86■□□□□ 0.61
Pcdhb3Q91XZ7 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb3Q91XZ7 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb3Q91XZ7 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhb3Q91XZ7 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.85■□□□□ 0.61
Pcdhb3Q91XZ7 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb3Q91XZ7 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Pcdhb3Q91XZ7 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb3Q91XZ7 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Pcdhb3Q91XZ7 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb3Q91XZ7 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb3Q91XZ7 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb3Q91XZ7 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Pcdhb3Q91XZ7 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Pcdhb3Q91XZ7 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb3Q91XZ7 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb3Q91XZ7 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb3Q91XZ7 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb3Q91XZ7 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb3Q91XZ7 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Pcdhb3Q91XZ7 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.84■□□□□ 0.61
Pcdhb3Q91XZ7 Gm12821-201ENSMUST00000120022 600 ntBASIC18.84■□□□□ 0.61
Pcdhb3Q91XZ7 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.84■□□□□ 0.61
Pcdhb3Q91XZ7 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.84■□□□□ 0.61
Pcdhb3Q91XZ7 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb3Q91XZ7 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Pcdhb3Q91XZ7 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdhb3Q91XZ7 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
Pcdhb3Q91XZ7 Gm7143-201ENSMUST00000222811 859 ntBASIC18.83■□□□□ 0.6
Pcdhb3Q91XZ7 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb3Q91XZ7 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb3Q91XZ7 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb3Q91XZ7 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb3Q91XZ7 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb3Q91XZ7 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb3Q91XZ7 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb3Q91XZ7 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb3Q91XZ7 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb3Q91XZ7 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Pcdhb3Q91XZ7 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb3Q91XZ7 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb3Q91XZ7 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb3Q91XZ7 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb3Q91XZ7 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb3Q91XZ7 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.82■□□□□ 0.6
Pcdhb3Q91XZ7 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.82■□□□□ 0.6
Pcdhb3Q91XZ7 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Pcdhb3Q91XZ7 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb3Q91XZ7 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.81■□□□□ 0.6
Pcdhb3Q91XZ7 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb3Q91XZ7 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb3Q91XZ7 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb3Q91XZ7 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb3Q91XZ7 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb3Q91XZ7 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb3Q91XZ7 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Pcdhb3Q91XZ7 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb3Q91XZ7 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb3Q91XZ7 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb3Q91XZ7 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb3Q91XZ7 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb3Q91XZ7 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.8■□□□□ 0.6
Pcdhb3Q91XZ7 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb3Q91XZ7 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb3Q91XZ7 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb3Q91XZ7 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb3Q91XZ7 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb3Q91XZ7 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
Pcdhb3Q91XZ7 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb3Q91XZ7 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb3Q91XZ7 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb3Q91XZ7 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb3Q91XZ7 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb3Q91XZ7 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb3Q91XZ7 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms