Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb6Q91XZ4 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb6Q91XZ4 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb6Q91XZ4 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb6Q91XZ4 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb6Q91XZ4 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb6Q91XZ4 Gm38205-201ENSMUST00000192243 258 ntBASIC19.53■□□□□ 0.72
Pcdhb6Q91XZ4 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb6Q91XZ4 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Pcdhb6Q91XZ4 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb6Q91XZ4 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Pcdhb6Q91XZ4 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhb6Q91XZ4 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Pcdhb6Q91XZ4 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhb6Q91XZ4 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhb6Q91XZ4 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhb6Q91XZ4 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhb6Q91XZ4 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhb6Q91XZ4 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Pcdhb6Q91XZ4 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Pcdhb6Q91XZ4 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb6Q91XZ4 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb6Q91XZ4 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb6Q91XZ4 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb6Q91XZ4 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Pcdhb6Q91XZ4 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.51■□□□□ 0.71
Pcdhb6Q91XZ4 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.51■□□□□ 0.71
Pcdhb6Q91XZ4 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb6Q91XZ4 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Pcdhb6Q91XZ4 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.51■□□□□ 0.71
Pcdhb6Q91XZ4 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.51■□□□□ 0.71
Pcdhb6Q91XZ4 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.51■□□□□ 0.71
Pcdhb6Q91XZ4 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
Pcdhb6Q91XZ4 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb6Q91XZ4 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb6Q91XZ4 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb6Q91XZ4 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb6Q91XZ4 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Pcdhb6Q91XZ4 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.51■□□□□ 0.71
Pcdhb6Q91XZ4 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.5■□□□□ 0.71
Pcdhb6Q91XZ4 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.5■□□□□ 0.71
Pcdhb6Q91XZ4 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb6Q91XZ4 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb6Q91XZ4 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb6Q91XZ4 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.5■□□□□ 0.71
Pcdhb6Q91XZ4 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb6Q91XZ4 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb6Q91XZ4 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb6Q91XZ4 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb6Q91XZ4 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb6Q91XZ4 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb6Q91XZ4 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb6Q91XZ4 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Pcdhb6Q91XZ4 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb6Q91XZ4 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.49■□□□□ 0.71
Pcdhb6Q91XZ4 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb6Q91XZ4 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb6Q91XZ4 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb6Q91XZ4 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Pcdhb6Q91XZ4 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
Pcdhb6Q91XZ4 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb6Q91XZ4 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb6Q91XZ4 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb6Q91XZ4 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhb6Q91XZ4 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhb6Q91XZ4 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.48■□□□□ 0.71
Pcdhb6Q91XZ4 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhb6Q91XZ4 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhb6Q91XZ4 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Pcdhb6Q91XZ4 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhb6Q91XZ4 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhb6Q91XZ4 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Pcdhb6Q91XZ4 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhb6Q91XZ4 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Pcdhb6Q91XZ4 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Pcdhb6Q91XZ4 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.48■□□□□ 0.71
Pcdhb6Q91XZ4 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhb6Q91XZ4 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhb6Q91XZ4 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhb6Q91XZ4 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Pcdhb6Q91XZ4 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Pcdhb6Q91XZ4 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhb6Q91XZ4 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.47■□□□□ 0.71
Pcdhb6Q91XZ4 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.47■□□□□ 0.71
Pcdhb6Q91XZ4 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhb6Q91XZ4 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhb6Q91XZ4 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhb6Q91XZ4 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.47■□□□□ 0.71
Pcdhb6Q91XZ4 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhb6Q91XZ4 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhb6Q91XZ4 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Pcdhb6Q91XZ4 Golph3-205ENSMUST00000228671 2842 ntBASIC19.47■□□□□ 0.71
Pcdhb6Q91XZ4 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Pcdhb6Q91XZ4 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Pcdhb6Q91XZ4 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb6Q91XZ4 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb6Q91XZ4 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.46■□□□□ 0.71
Pcdhb6Q91XZ4 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.46■□□□□ 0.71
Pcdhb6Q91XZ4 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb6Q91XZ4 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms