Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Pcdhgc3Q91XX1 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhgc3Q91XX1 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhgc3Q91XX1 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhgc3Q91XX1 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhgc3Q91XX1 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhgc3Q91XX1 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.89■□□□□ 0.45
Pcdhgc3Q91XX1 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhgc3Q91XX1 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
Pcdhgc3Q91XX1 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Pcdhgc3Q91XX1 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhgc3Q91XX1 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhgc3Q91XX1 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhgc3Q91XX1 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Pcdhgc3Q91XX1 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Pcdhgc3Q91XX1 Gm7417-201ENSMUST00000192950 473 ntBASIC17.88■□□□□ 0.45
Pcdhgc3Q91XX1 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhgc3Q91XX1 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhgc3Q91XX1 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhgc3Q91XX1 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhgc3Q91XX1 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhgc3Q91XX1 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhgc3Q91XX1 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhgc3Q91XX1 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhgc3Q91XX1 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhgc3Q91XX1 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
Pcdhgc3Q91XX1 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhgc3Q91XX1 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhgc3Q91XX1 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhgc3Q91XX1 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhgc3Q91XX1 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhgc3Q91XX1 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhgc3Q91XX1 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhgc3Q91XX1 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhgc3Q91XX1 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhgc3Q91XX1 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.86■□□□□ 0.45
Pcdhgc3Q91XX1 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.86■□□□□ 0.45
Pcdhgc3Q91XX1 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Pcdhgc3Q91XX1 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.86■□□□□ 0.45
Pcdhgc3Q91XX1 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC17.86■□□□□ 0.45
Pcdhgc3Q91XX1 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhgc3Q91XX1 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhgc3Q91XX1 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhgc3Q91XX1 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhgc3Q91XX1 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhgc3Q91XX1 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Pcdhgc3Q91XX1 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhgc3Q91XX1 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhgc3Q91XX1 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhgc3Q91XX1 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhgc3Q91XX1 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhgc3Q91XX1 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhgc3Q91XX1 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.85■□□□□ 0.45
Pcdhgc3Q91XX1 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.85■□□□□ 0.45
Pcdhgc3Q91XX1 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.85■□□□□ 0.45
Pcdhgc3Q91XX1 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.85■□□□□ 0.45
Pcdhgc3Q91XX1 Etf1-202ENSMUST00000180351 108 ntBASIC17.85■□□□□ 0.45
Pcdhgc3Q91XX1 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC17.85■□□□□ 0.45
Pcdhgc3Q91XX1 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhgc3Q91XX1 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhgc3Q91XX1 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhgc3Q91XX1 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Pcdhgc3Q91XX1 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhgc3Q91XX1 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhgc3Q91XX1 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
Pcdhgc3Q91XX1 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Pcdhgc3Q91XX1 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Pcdhgc3Q91XX1 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Pcdhgc3Q91XX1 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhgc3Q91XX1 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhgc3Q91XX1 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhgc3Q91XX1 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhgc3Q91XX1 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhgc3Q91XX1 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhgc3Q91XX1 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhgc3Q91XX1 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhgc3Q91XX1 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Pcdhgc3Q91XX1 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Pcdhgc3Q91XX1 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhgc3Q91XX1 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.84■□□□□ 0.45
Pcdhgc3Q91XX1 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhgc3Q91XX1 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhgc3Q91XX1 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Pcdhgc3Q91XX1 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Pcdhgc3Q91XX1 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Pcdhgc3Q91XX1 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.83■□□□□ 0.45
Pcdhgc3Q91XX1 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Pcdhgc3Q91XX1 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Pcdhgc3Q91XX1 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhgc3Q91XX1 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
Pcdhgc3Q91XX1 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhgc3Q91XX1 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhgc3Q91XX1 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhgc3Q91XX1 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Pcdhgc3Q91XX1 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhgc3Q91XX1 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.83■□□□□ 0.44
Pcdhgc3Q91XX1 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhgc3Q91XX1 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
Pcdhgc3Q91XX1 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhgc3Q91XX1 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms