Protein–RNA interactions for Protein: Q91X43

Sh3d19, SH3 domain-containing protein 19, mousemouse

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d19Q91X43 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Sh3d19Q91X43 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Sh3d19Q91X43 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sh3d19Q91X43 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sh3d19Q91X43 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.76
Sh3d19Q91X43 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sh3d19Q91X43 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.82■□□□□ 0.76
Sh3d19Q91X43 Mir5133-201ENSMUST00000174955 77 ntBASIC19.82■□□□□ 0.76
Sh3d19Q91X43 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sh3d19Q91X43 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sh3d19Q91X43 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sh3d19Q91X43 Gm6365-201ENSMUST00000054711 744 ntBASIC19.82■□□□□ 0.76
Sh3d19Q91X43 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Sh3d19Q91X43 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sh3d19Q91X43 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Sh3d19Q91X43 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Sh3d19Q91X43 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sh3d19Q91X43 Gm13148-201ENSMUST00000118892 745 ntBASIC19.81■□□□□ 0.76
Sh3d19Q91X43 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.81■□□□□ 0.76
Sh3d19Q91X43 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sh3d19Q91X43 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sh3d19Q91X43 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Sh3d19Q91X43 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sh3d19Q91X43 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sh3d19Q91X43 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sh3d19Q91X43 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sh3d19Q91X43 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sh3d19Q91X43 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sh3d19Q91X43 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sh3d19Q91X43 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.8■□□□□ 0.76
Sh3d19Q91X43 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.8■□□□□ 0.76
Sh3d19Q91X43 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sh3d19Q91X43 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Sh3d19Q91X43 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sh3d19Q91X43 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Sh3d19Q91X43 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Sh3d19Q91X43 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sh3d19Q91X43 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.79■□□□□ 0.76
Sh3d19Q91X43 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Sh3d19Q91X43 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sh3d19Q91X43 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sh3d19Q91X43 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.79■□□□□ 0.76
Sh3d19Q91X43 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.79■□□□□ 0.76
Sh3d19Q91X43 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.79■□□□□ 0.76
Sh3d19Q91X43 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
Sh3d19Q91X43 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Sh3d19Q91X43 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Sh3d19Q91X43 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
Sh3d19Q91X43 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sh3d19Q91X43 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sh3d19Q91X43 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Sh3d19Q91X43 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.78■□□□□ 0.76
Sh3d19Q91X43 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sh3d19Q91X43 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Sh3d19Q91X43 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sh3d19Q91X43 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.78■□□□□ 0.76
Sh3d19Q91X43 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.78■□□□□ 0.76
Sh3d19Q91X43 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.78■□□□□ 0.76
Sh3d19Q91X43 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.78■□□□□ 0.76
Sh3d19Q91X43 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sh3d19Q91X43 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sh3d19Q91X43 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sh3d19Q91X43 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Sh3d19Q91X43 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Sh3d19Q91X43 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sh3d19Q91X43 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sh3d19Q91X43 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Sh3d19Q91X43 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Sh3d19Q91X43 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Sh3d19Q91X43 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sh3d19Q91X43 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
Sh3d19Q91X43 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sh3d19Q91X43 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sh3d19Q91X43 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Sh3d19Q91X43 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Sh3d19Q91X43 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sh3d19Q91X43 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Sh3d19Q91X43 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sh3d19Q91X43 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Sh3d19Q91X43 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.76■□□□□ 0.75
Sh3d19Q91X43 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.76■□□□□ 0.75
Sh3d19Q91X43 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Sh3d19Q91X43 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sh3d19Q91X43 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sh3d19Q91X43 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Sh3d19Q91X43 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sh3d19Q91X43 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sh3d19Q91X43 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Sh3d19Q91X43 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sh3d19Q91X43 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Sh3d19Q91X43 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sh3d19Q91X43 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sh3d19Q91X43 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sh3d19Q91X43 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sh3d19Q91X43 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sh3d19Q91X43 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.75■□□□□ 0.75
Sh3d19Q91X43 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
Sh3d19Q91X43 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sh3d19Q91X43 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Sh3d19Q91X43 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms