Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ddx39aQ8VDW0 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC21.1■□□□□ 0.97
Ddx39aQ8VDW0 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC21.1■□□□□ 0.97
Ddx39aQ8VDW0 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ddx39aQ8VDW0 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ddx39aQ8VDW0 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ddx39aQ8VDW0 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ddx39aQ8VDW0 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ddx39aQ8VDW0 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ddx39aQ8VDW0 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ddx39aQ8VDW0 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ddx39aQ8VDW0 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ddx39aQ8VDW0 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Ddx39aQ8VDW0 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.09■□□□□ 0.97
Ddx39aQ8VDW0 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ddx39aQ8VDW0 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ddx39aQ8VDW0 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Ddx39aQ8VDW0 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Ddx39aQ8VDW0 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ddx39aQ8VDW0 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ddx39aQ8VDW0 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ddx39aQ8VDW0 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Ddx39aQ8VDW0 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Ddx39aQ8VDW0 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC21.08■□□□□ 0.97
Ddx39aQ8VDW0 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ddx39aQ8VDW0 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ddx39aQ8VDW0 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ddx39aQ8VDW0 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC21.08■□□□□ 0.96
Ddx39aQ8VDW0 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ddx39aQ8VDW0 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ddx39aQ8VDW0 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ddx39aQ8VDW0 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ddx39aQ8VDW0 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ddx39aQ8VDW0 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Ddx39aQ8VDW0 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ddx39aQ8VDW0 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ddx39aQ8VDW0 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ddx39aQ8VDW0 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx39aQ8VDW0 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC21.06■□□□□ 0.96
Ddx39aQ8VDW0 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx39aQ8VDW0 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx39aQ8VDW0 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx39aQ8VDW0 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Ddx39aQ8VDW0 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx39aQ8VDW0 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx39aQ8VDW0 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx39aQ8VDW0 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx39aQ8VDW0 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Ddx39aQ8VDW0 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Ddx39aQ8VDW0 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx39aQ8VDW0 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx39aQ8VDW0 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Ddx39aQ8VDW0 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx39aQ8VDW0 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Ddx39aQ8VDW0 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Ddx39aQ8VDW0 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ddx39aQ8VDW0 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ddx39aQ8VDW0 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC21.05■□□□□ 0.96
Ddx39aQ8VDW0 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ddx39aQ8VDW0 Gm26971-201ENSMUST00000182423 1072 ntBASIC21.05■□□□□ 0.96
Ddx39aQ8VDW0 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC21.05■□□□□ 0.96
Ddx39aQ8VDW0 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ddx39aQ8VDW0 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ddx39aQ8VDW0 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ddx39aQ8VDW0 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Ddx39aQ8VDW0 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Ddx39aQ8VDW0 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx39aQ8VDW0 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
Ddx39aQ8VDW0 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx39aQ8VDW0 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC21.04■□□□□ 0.96
Ddx39aQ8VDW0 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx39aQ8VDW0 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx39aQ8VDW0 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx39aQ8VDW0 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx39aQ8VDW0 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ddx39aQ8VDW0 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ddx39aQ8VDW0 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ddx39aQ8VDW0 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ddx39aQ8VDW0 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
Ddx39aQ8VDW0 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ddx39aQ8VDW0 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ddx39aQ8VDW0 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ddx39aQ8VDW0 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ddx39aQ8VDW0 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ddx39aQ8VDW0 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ddx39aQ8VDW0 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ddx39aQ8VDW0 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ddx39aQ8VDW0 Gm12527-201ENSMUST00000117967 564 ntBASIC21.02■□□□□ 0.96
Ddx39aQ8VDW0 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ddx39aQ8VDW0 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ddx39aQ8VDW0 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ddx39aQ8VDW0 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ddx39aQ8VDW0 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ddx39aQ8VDW0 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ddx39aQ8VDW0 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Ddx39aQ8VDW0 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ddx39aQ8VDW0 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ddx39aQ8VDW0 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ddx39aQ8VDW0 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ddx39aQ8VDW0 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms