Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.2■□□□□ 0.5
Rnf8Q8VC56 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf8Q8VC56 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf8Q8VC56 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Rnf8Q8VC56 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf8Q8VC56 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf8Q8VC56 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf8Q8VC56 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf8Q8VC56 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.19■□□□□ 0.5
Rnf8Q8VC56 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
Rnf8Q8VC56 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.19■□□□□ 0.5
Rnf8Q8VC56 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf8Q8VC56 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf8Q8VC56 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf8Q8VC56 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf8Q8VC56 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf8Q8VC56 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf8Q8VC56 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.19■□□□□ 0.5
Rnf8Q8VC56 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf8Q8VC56 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Rnf8Q8VC56 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.18■□□□□ 0.5
Rnf8Q8VC56 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.18■□□□□ 0.5
Rnf8Q8VC56 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Rnf8Q8VC56 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf8Q8VC56 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf8Q8VC56 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf8Q8VC56 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.17■□□□□ 0.5
Rnf8Q8VC56 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Rnf8Q8VC56 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf8Q8VC56 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf8Q8VC56 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf8Q8VC56 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf8Q8VC56 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf8Q8VC56 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.16■□□□□ 0.5
Rnf8Q8VC56 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.16■□□□□ 0.5
Rnf8Q8VC56 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.16■□□□□ 0.5
Rnf8Q8VC56 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf8Q8VC56 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf8Q8VC56 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf8Q8VC56 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf8Q8VC56 Gm12251-201ENSMUST00000117893 792 ntBASIC18.16■□□□□ 0.5
Rnf8Q8VC56 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.16■□□□□ 0.5
Rnf8Q8VC56 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf8Q8VC56 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf8Q8VC56 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf8Q8VC56 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf8Q8VC56 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf8Q8VC56 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf8Q8VC56 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf8Q8VC56 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
Rnf8Q8VC56 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf8Q8VC56 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
Rnf8Q8VC56 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.15■□□□□ 0.5
Rnf8Q8VC56 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf8Q8VC56 Gm43173-201ENSMUST00000202246 593 ntBASIC18.15■□□□□ 0.5
Rnf8Q8VC56 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf8Q8VC56 Serp2-204ENSMUST00000228055 705 ntBASIC18.15■□□□□ 0.5
Rnf8Q8VC56 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf8Q8VC56 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf8Q8VC56 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.15■□□□□ 0.5
Rnf8Q8VC56 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf8Q8VC56 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf8Q8VC56 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf8Q8VC56 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
Rnf8Q8VC56 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rnf8Q8VC56 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rnf8Q8VC56 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.14■□□□□ 0.5
Rnf8Q8VC56 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Rnf8Q8VC56 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf8Q8VC56 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf8Q8VC56 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.14■□□□□ 0.49
Rnf8Q8VC56 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf8Q8VC56 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf8Q8VC56 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.14■□□□□ 0.49
Rnf8Q8VC56 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf8Q8VC56 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf8Q8VC56 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf8Q8VC56 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf8Q8VC56 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf8Q8VC56 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf8Q8VC56 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf8Q8VC56 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.14■□□□□ 0.49
Rnf8Q8VC56 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.14■□□□□ 0.49
Rnf8Q8VC56 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Rnf8Q8VC56 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf8Q8VC56 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Rnf8Q8VC56 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf8Q8VC56 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.13■□□□□ 0.49
Rnf8Q8VC56 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf8Q8VC56 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.13■□□□□ 0.49
Rnf8Q8VC56 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf8Q8VC56 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.13■□□□□ 0.49
Rnf8Q8VC56 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf8Q8VC56 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.13■□□□□ 0.49
Rnf8Q8VC56 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
Rnf8Q8VC56 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf8Q8VC56 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf8Q8VC56 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf8Q8VC56 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf8Q8VC56 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms