Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Sh3kbp1Q8R550 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sh3kbp1Q8R550 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sh3kbp1Q8R550 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Sh3kbp1Q8R550 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Sh3kbp1Q8R550 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.51■□□□□ 0.71
Sh3kbp1Q8R550 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sh3kbp1Q8R550 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sh3kbp1Q8R550 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sh3kbp1Q8R550 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sh3kbp1Q8R550 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sh3kbp1Q8R550 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.5■□□□□ 0.71
Sh3kbp1Q8R550 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sh3kbp1Q8R550 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sh3kbp1Q8R550 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sh3kbp1Q8R550 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sh3kbp1Q8R550 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.49■□□□□ 0.71
Sh3kbp1Q8R550 Gm12933-201ENSMUST00000120203 872 ntBASIC19.49■□□□□ 0.71
Sh3kbp1Q8R550 Gm7514-201ENSMUST00000209475 934 ntBASIC19.49■□□□□ 0.71
Sh3kbp1Q8R550 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Sh3kbp1Q8R550 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Sh3kbp1Q8R550 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Sh3kbp1Q8R550 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sh3kbp1Q8R550 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sh3kbp1Q8R550 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sh3kbp1Q8R550 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sh3kbp1Q8R550 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Sh3kbp1Q8R550 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.48■□□□□ 0.71
Sh3kbp1Q8R550 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sh3kbp1Q8R550 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sh3kbp1Q8R550 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sh3kbp1Q8R550 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sh3kbp1Q8R550 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Sh3kbp1Q8R550 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sh3kbp1Q8R550 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.47■□□□□ 0.71
Sh3kbp1Q8R550 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sh3kbp1Q8R550 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.47■□□□□ 0.71
Sh3kbp1Q8R550 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Sh3kbp1Q8R550 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Sh3kbp1Q8R550 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.47■□□□□ 0.71
Sh3kbp1Q8R550 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sh3kbp1Q8R550 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
Sh3kbp1Q8R550 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sh3kbp1Q8R550 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sh3kbp1Q8R550 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Sh3kbp1Q8R550 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sh3kbp1Q8R550 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sh3kbp1Q8R550 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sh3kbp1Q8R550 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.46■□□□□ 0.71
Sh3kbp1Q8R550 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.46■□□□□ 0.71
Sh3kbp1Q8R550 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.46■□□□□ 0.71
Sh3kbp1Q8R550 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Sh3kbp1Q8R550 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
Sh3kbp1Q8R550 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Sh3kbp1Q8R550 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sh3kbp1Q8R550 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Sh3kbp1Q8R550 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sh3kbp1Q8R550 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Sh3kbp1Q8R550 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sh3kbp1Q8R550 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sh3kbp1Q8R550 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sh3kbp1Q8R550 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sh3kbp1Q8R550 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sh3kbp1Q8R550 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sh3kbp1Q8R550 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Sh3kbp1Q8R550 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Sh3kbp1Q8R550 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sh3kbp1Q8R550 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sh3kbp1Q8R550 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Sh3kbp1Q8R550 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Sh3kbp1Q8R550 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Sh3kbp1Q8R550 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sh3kbp1Q8R550 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sh3kbp1Q8R550 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Sh3kbp1Q8R550 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.44■□□□□ 0.7
Sh3kbp1Q8R550 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sh3kbp1Q8R550 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Sh3kbp1Q8R550 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.44■□□□□ 0.7
Sh3kbp1Q8R550 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Sh3kbp1Q8R550 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sh3kbp1Q8R550 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Sh3kbp1Q8R550 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.44■□□□□ 0.7
Sh3kbp1Q8R550 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.44■□□□□ 0.7
Sh3kbp1Q8R550 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sh3kbp1Q8R550 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sh3kbp1Q8R550 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Sh3kbp1Q8R550 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sh3kbp1Q8R550 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sh3kbp1Q8R550 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sh3kbp1Q8R550 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sh3kbp1Q8R550 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sh3kbp1Q8R550 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.43■□□□□ 0.7
Sh3kbp1Q8R550 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Sh3kbp1Q8R550 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.43■□□□□ 0.7
Sh3kbp1Q8R550 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sh3kbp1Q8R550 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Sh3kbp1Q8R550 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Sh3kbp1Q8R550 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Sh3kbp1Q8R550 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sh3kbp1Q8R550 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms