Protein–RNA interactions for Protein: Q8R3Z5

Cacnb1, Voltage-dependent L-type calcium channel subunit beta-1, mousemouse

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb1Q8R3Z5 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Cacnb1Q8R3Z5 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Cacnb1Q8R3Z5 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Cacnb1Q8R3Z5 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cacnb1Q8R3Z5 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cacnb1Q8R3Z5 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cacnb1Q8R3Z5 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cacnb1Q8R3Z5 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC21.14■□□□□ 0.97
Cacnb1Q8R3Z5 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cacnb1Q8R3Z5 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cacnb1Q8R3Z5 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cacnb1Q8R3Z5 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Cacnb1Q8R3Z5 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cacnb1Q8R3Z5 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cacnb1Q8R3Z5 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC21.13■□□□□ 0.97
Cacnb1Q8R3Z5 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Cacnb1Q8R3Z5 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC21.13■□□□□ 0.97
Cacnb1Q8R3Z5 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cacnb1Q8R3Z5 Gm9988-201ENSMUST00000069786 435 ntBASIC21.13■□□□□ 0.97
Cacnb1Q8R3Z5 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Cacnb1Q8R3Z5 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cacnb1Q8R3Z5 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cacnb1Q8R3Z5 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cacnb1Q8R3Z5 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Cacnb1Q8R3Z5 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC21.12■□□□□ 0.97
Cacnb1Q8R3Z5 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cacnb1Q8R3Z5 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cacnb1Q8R3Z5 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
Cacnb1Q8R3Z5 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cacnb1Q8R3Z5 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Cacnb1Q8R3Z5 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cacnb1Q8R3Z5 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cacnb1Q8R3Z5 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cacnb1Q8R3Z5 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cacnb1Q8R3Z5 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Cacnb1Q8R3Z5 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cacnb1Q8R3Z5 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cacnb1Q8R3Z5 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cacnb1Q8R3Z5 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cacnb1Q8R3Z5 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cacnb1Q8R3Z5 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cacnb1Q8R3Z5 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC21.11■□□□□ 0.97
Cacnb1Q8R3Z5 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cacnb1Q8R3Z5 Gm17872-201ENSMUST00000222550 532 ntBASIC21.11■□□□□ 0.97
Cacnb1Q8R3Z5 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cacnb1Q8R3Z5 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cacnb1Q8R3Z5 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cacnb1Q8R3Z5 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cacnb1Q8R3Z5 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC21.11■□□□□ 0.97
Cacnb1Q8R3Z5 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Cacnb1Q8R3Z5 Gm10129-202ENSMUST00000193100 1316 ntBASIC21.1■□□□□ 0.97
Cacnb1Q8R3Z5 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cacnb1Q8R3Z5 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cacnb1Q8R3Z5 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Cacnb1Q8R3Z5 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Cacnb1Q8R3Z5 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cacnb1Q8R3Z5 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC21.1■□□□□ 0.97
Cacnb1Q8R3Z5 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cacnb1Q8R3Z5 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
Cacnb1Q8R3Z5 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cacnb1Q8R3Z5 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Cacnb1Q8R3Z5 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC21.09■□□□□ 0.97
Cacnb1Q8R3Z5 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
Cacnb1Q8R3Z5 Gm28745-201ENSMUST00000190069 305 ntBASIC21.09■□□□□ 0.97
Cacnb1Q8R3Z5 Gm38205-201ENSMUST00000192243 258 ntBASIC21.09■□□□□ 0.97
Cacnb1Q8R3Z5 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC21.09■□□□□ 0.97
Cacnb1Q8R3Z5 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
Cacnb1Q8R3Z5 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Cacnb1Q8R3Z5 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC21.09■□□□□ 0.97
Cacnb1Q8R3Z5 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
Cacnb1Q8R3Z5 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Cacnb1Q8R3Z5 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cacnb1Q8R3Z5 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cacnb1Q8R3Z5 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cacnb1Q8R3Z5 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cacnb1Q8R3Z5 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cacnb1Q8R3Z5 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cacnb1Q8R3Z5 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cacnb1Q8R3Z5 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC21.08■□□□□ 0.97
Cacnb1Q8R3Z5 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cacnb1Q8R3Z5 Reep4-203ENSMUST00000226563 1444 ntBASIC21.08■□□□□ 0.97
Cacnb1Q8R3Z5 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cacnb1Q8R3Z5 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cacnb1Q8R3Z5 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cacnb1Q8R3Z5 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cacnb1Q8R3Z5 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cacnb1Q8R3Z5 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC21.07■□□□□ 0.96
Cacnb1Q8R3Z5 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cacnb1Q8R3Z5 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cacnb1Q8R3Z5 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cacnb1Q8R3Z5 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC21.07■□□□□ 0.96
Cacnb1Q8R3Z5 AC102523.2-201ENSMUST00000227813 983 ntBASIC21.07■□□□□ 0.96
Cacnb1Q8R3Z5 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cacnb1Q8R3Z5 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cacnb1Q8R3Z5 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Cacnb1Q8R3Z5 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cacnb1Q8R3Z5 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Cacnb1Q8R3Z5 Gm13263-201ENSMUST00000121271 838 ntBASIC21.06■□□□□ 0.96
Cacnb1Q8R3Z5 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC21.06■□□□□ 0.96
Cacnb1Q8R3Z5 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms