Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Ddx54Q8K4L0 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Ddx54Q8K4L0 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Ddx54Q8K4L0 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Ddx54Q8K4L0 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Ddx54Q8K4L0 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Ddx54Q8K4L0 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Ddx54Q8K4L0 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Ddx54Q8K4L0 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
Ddx54Q8K4L0 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC25.02■■□□□ 1.6
Ddx54Q8K4L0 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC25.02■■□□□ 1.6
Ddx54Q8K4L0 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Ddx54Q8K4L0 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
Ddx54Q8K4L0 Gm30025-201ENSMUST00000218555 728 ntBASIC25.02■■□□□ 1.6
Ddx54Q8K4L0 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Ddx54Q8K4L0 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC25.02■■□□□ 1.6
Ddx54Q8K4L0 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.6
Ddx54Q8K4L0 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Ddx54Q8K4L0 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Ddx54Q8K4L0 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
Ddx54Q8K4L0 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Ddx54Q8K4L0 Gm6659-201ENSMUST00000174752 547 ntBASIC25.01■■□□□ 1.59
Ddx54Q8K4L0 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC25.01■■□□□ 1.59
Ddx54Q8K4L0 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC25.01■■□□□ 1.59
Ddx54Q8K4L0 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Ddx54Q8K4L0 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Ddx54Q8K4L0 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
Ddx54Q8K4L0 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC25■■□□□ 1.59
Ddx54Q8K4L0 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
Ddx54Q8K4L0 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
Ddx54Q8K4L0 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Ddx54Q8K4L0 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
Ddx54Q8K4L0 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Ddx54Q8K4L0 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Ddx54Q8K4L0 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Ddx54Q8K4L0 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Ddx54Q8K4L0 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC24.99■■□□□ 1.59
Ddx54Q8K4L0 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC24.99■■□□□ 1.59
Ddx54Q8K4L0 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC24.99■■□□□ 1.59
Ddx54Q8K4L0 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC24.99■■□□□ 1.59
Ddx54Q8K4L0 Gm43672-201ENSMUST00000199072 1731 ntBASIC24.99■■□□□ 1.59
Ddx54Q8K4L0 AC175538.1-201ENSMUST00000225343 1269 ntBASIC24.99■■□□□ 1.59
Ddx54Q8K4L0 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Ddx54Q8K4L0 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC24.99■■□□□ 1.59
Ddx54Q8K4L0 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Ddx54Q8K4L0 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Ddx54Q8K4L0 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
Ddx54Q8K4L0 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Ddx54Q8K4L0 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Ddx54Q8K4L0 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Ddx54Q8K4L0 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC24.98■■□□□ 1.59
Ddx54Q8K4L0 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Ddx54Q8K4L0 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Ddx54Q8K4L0 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Ddx54Q8K4L0 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Ddx54Q8K4L0 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC24.98■■□□□ 1.59
Ddx54Q8K4L0 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Ddx54Q8K4L0 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Ddx54Q8K4L0 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Ddx54Q8K4L0 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Ddx54Q8K4L0 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Ddx54Q8K4L0 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Ddx54Q8K4L0 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Ddx54Q8K4L0 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Ddx54Q8K4L0 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Ddx54Q8K4L0 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Ddx54Q8K4L0 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
Ddx54Q8K4L0 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
Ddx54Q8K4L0 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Ddx54Q8K4L0 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Ddx54Q8K4L0 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Ddx54Q8K4L0 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Ddx54Q8K4L0 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Ddx54Q8K4L0 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Ddx54Q8K4L0 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Ddx54Q8K4L0 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC24.96■■□□□ 1.59
Ddx54Q8K4L0 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
Ddx54Q8K4L0 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
Ddx54Q8K4L0 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Ddx54Q8K4L0 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.59
Ddx54Q8K4L0 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.59
Ddx54Q8K4L0 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
Ddx54Q8K4L0 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Ddx54Q8K4L0 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.58
Ddx54Q8K4L0 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
Ddx54Q8K4L0 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.58
Ddx54Q8K4L0 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Ddx54Q8K4L0 Alkbh1-212ENSMUST00000185301 408 ntBASIC24.95■■□□□ 1.58
Ddx54Q8K4L0 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC24.95■■□□□ 1.58
Ddx54Q8K4L0 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Ddx54Q8K4L0 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.58
Ddx54Q8K4L0 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
Ddx54Q8K4L0 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
Ddx54Q8K4L0 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
Ddx54Q8K4L0 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Ddx54Q8K4L0 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC24.94■■□□□ 1.58
Ddx54Q8K4L0 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Ddx54Q8K4L0 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Ddx54Q8K4L0 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Ddx54Q8K4L0 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC24.94■■□□□ 1.58
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms