Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Col23a1Q8K4G2 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Col23a1Q8K4G2 Gm30025-201ENSMUST00000218555 728 ntBASIC23.34■■□□□ 1.33
Col23a1Q8K4G2 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
Col23a1Q8K4G2 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
Col23a1Q8K4G2 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
Col23a1Q8K4G2 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Col23a1Q8K4G2 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Col23a1Q8K4G2 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Col23a1Q8K4G2 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC23.33■■□□□ 1.33
Col23a1Q8K4G2 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Col23a1Q8K4G2 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC23.33■■□□□ 1.33
Col23a1Q8K4G2 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Col23a1Q8K4G2 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC23.33■■□□□ 1.33
Col23a1Q8K4G2 Gm21814-202ENSMUST00000203277 873 ntBASIC23.33■■□□□ 1.33
Col23a1Q8K4G2 AC140264.2-202ENSMUST00000218746 817 ntBASIC23.33■■□□□ 1.33
Col23a1Q8K4G2 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
Col23a1Q8K4G2 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Col23a1Q8K4G2 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
Col23a1Q8K4G2 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Col23a1Q8K4G2 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Col23a1Q8K4G2 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Col23a1Q8K4G2 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Col23a1Q8K4G2 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Col23a1Q8K4G2 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Col23a1Q8K4G2 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Col23a1Q8K4G2 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
Col23a1Q8K4G2 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Col23a1Q8K4G2 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Col23a1Q8K4G2 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Col23a1Q8K4G2 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC23.31■■□□□ 1.32
Col23a1Q8K4G2 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Col23a1Q8K4G2 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Col23a1Q8K4G2 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Col23a1Q8K4G2 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Col23a1Q8K4G2 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Col23a1Q8K4G2 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
Col23a1Q8K4G2 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Col23a1Q8K4G2 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC23.3■■□□□ 1.32
Col23a1Q8K4G2 Gm11927-201ENSMUST00000118472 759 ntBASIC23.3■■□□□ 1.32
Col23a1Q8K4G2 Gm13559-201ENSMUST00000120476 863 ntBASIC23.3■■□□□ 1.32
Col23a1Q8K4G2 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Col23a1Q8K4G2 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Col23a1Q8K4G2 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC23.3■■□□□ 1.32
Col23a1Q8K4G2 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC23.3■■□□□ 1.32
Col23a1Q8K4G2 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Col23a1Q8K4G2 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC23.3■■□□□ 1.32
Col23a1Q8K4G2 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Col23a1Q8K4G2 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Col23a1Q8K4G2 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Col23a1Q8K4G2 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
Col23a1Q8K4G2 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Col23a1Q8K4G2 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Col23a1Q8K4G2 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Col23a1Q8K4G2 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC23.29■■□□□ 1.32
Col23a1Q8K4G2 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Col23a1Q8K4G2 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC23.29■■□□□ 1.32
Col23a1Q8K4G2 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC23.29■■□□□ 1.32
Col23a1Q8K4G2 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
Col23a1Q8K4G2 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Col23a1Q8K4G2 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Col23a1Q8K4G2 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC23.28■■□□□ 1.32
Col23a1Q8K4G2 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Col23a1Q8K4G2 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
Col23a1Q8K4G2 Gm6728-201ENSMUST00000178117 1065 ntBASIC23.28■■□□□ 1.32
Col23a1Q8K4G2 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC23.28■■□□□ 1.32
Col23a1Q8K4G2 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Col23a1Q8K4G2 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Col23a1Q8K4G2 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Col23a1Q8K4G2 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Col23a1Q8K4G2 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Col23a1Q8K4G2 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Col23a1Q8K4G2 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Col23a1Q8K4G2 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Col23a1Q8K4G2 Arhgef4-208ENSMUST00000211073 171 ntBASIC23.27■■□□□ 1.32
Col23a1Q8K4G2 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Col23a1Q8K4G2 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Col23a1Q8K4G2 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
Col23a1Q8K4G2 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Col23a1Q8K4G2 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Col23a1Q8K4G2 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Col23a1Q8K4G2 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Col23a1Q8K4G2 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Col23a1Q8K4G2 Gm26766-202ENSMUST00000227544 2347 ntBASIC23.26■■□□□ 1.31
Col23a1Q8K4G2 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
Col23a1Q8K4G2 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Col23a1Q8K4G2 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC23.26■■□□□ 1.31
Col23a1Q8K4G2 Gm11539-201ENSMUST00000119837 557 ntBASIC23.26■■□□□ 1.31
Col23a1Q8K4G2 Gm13436-201ENSMUST00000120418 567 ntBASIC23.26■■□□□ 1.31
Col23a1Q8K4G2 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
Col23a1Q8K4G2 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Col23a1Q8K4G2 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Col23a1Q8K4G2 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Col23a1Q8K4G2 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Col23a1Q8K4G2 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Col23a1Q8K4G2 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Col23a1Q8K4G2 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC23.25■■□□□ 1.31
Col23a1Q8K4G2 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Col23a1Q8K4G2 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Col23a1Q8K4G2 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms