Protein–RNA interactions for Protein: Q8K2Z2

Prpf39, Pre-mRNA-processing factor 39, mousemouse

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39Q8K2Z2 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prpf39Q8K2Z2 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Prpf39Q8K2Z2 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Prpf39Q8K2Z2 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prpf39Q8K2Z2 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prpf39Q8K2Z2 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prpf39Q8K2Z2 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.68■□□□□ 0.74
Prpf39Q8K2Z2 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.68■□□□□ 0.74
Prpf39Q8K2Z2 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Prpf39Q8K2Z2 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Prpf39Q8K2Z2 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.68■□□□□ 0.74
Prpf39Q8K2Z2 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Prpf39Q8K2Z2 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Prpf39Q8K2Z2 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Prpf39Q8K2Z2 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prpf39Q8K2Z2 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.67■□□□□ 0.74
Prpf39Q8K2Z2 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prpf39Q8K2Z2 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prpf39Q8K2Z2 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Prpf39Q8K2Z2 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.66■□□□□ 0.74
Prpf39Q8K2Z2 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Prpf39Q8K2Z2 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Prpf39Q8K2Z2 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Prpf39Q8K2Z2 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Prpf39Q8K2Z2 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Prpf39Q8K2Z2 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
Prpf39Q8K2Z2 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.66■□□□□ 0.74
Prpf39Q8K2Z2 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.66■□□□□ 0.74
Prpf39Q8K2Z2 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.66■□□□□ 0.74
Prpf39Q8K2Z2 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.66■□□□□ 0.74
Prpf39Q8K2Z2 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.66■□□□□ 0.74
Prpf39Q8K2Z2 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Prpf39Q8K2Z2 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.66■□□□□ 0.74
Prpf39Q8K2Z2 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Prpf39Q8K2Z2 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Prpf39Q8K2Z2 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prpf39Q8K2Z2 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prpf39Q8K2Z2 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prpf39Q8K2Z2 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prpf39Q8K2Z2 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Prpf39Q8K2Z2 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prpf39Q8K2Z2 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prpf39Q8K2Z2 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.65■□□□□ 0.74
Prpf39Q8K2Z2 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prpf39Q8K2Z2 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prpf39Q8K2Z2 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prpf39Q8K2Z2 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.65■□□□□ 0.74
Prpf39Q8K2Z2 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prpf39Q8K2Z2 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prpf39Q8K2Z2 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prpf39Q8K2Z2 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Prpf39Q8K2Z2 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Prpf39Q8K2Z2 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.64■□□□□ 0.73
Prpf39Q8K2Z2 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.64■□□□□ 0.73
Prpf39Q8K2Z2 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.64■□□□□ 0.73
Prpf39Q8K2Z2 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.64■□□□□ 0.73
Prpf39Q8K2Z2 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Prpf39Q8K2Z2 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Prpf39Q8K2Z2 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Prpf39Q8K2Z2 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Prpf39Q8K2Z2 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Prpf39Q8K2Z2 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Prpf39Q8K2Z2 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Prpf39Q8K2Z2 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Prpf39Q8K2Z2 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Prpf39Q8K2Z2 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Prpf39Q8K2Z2 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Prpf39Q8K2Z2 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Prpf39Q8K2Z2 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Prpf39Q8K2Z2 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Prpf39Q8K2Z2 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Prpf39Q8K2Z2 Gm13234-201ENSMUST00000120010 747 ntBASIC19.63■□□□□ 0.73
Prpf39Q8K2Z2 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Prpf39Q8K2Z2 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Prpf39Q8K2Z2 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Prpf39Q8K2Z2 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Prpf39Q8K2Z2 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Prpf39Q8K2Z2 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Prpf39Q8K2Z2 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Prpf39Q8K2Z2 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.62■□□□□ 0.73
Prpf39Q8K2Z2 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Prpf39Q8K2Z2 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.62■□□□□ 0.73
Prpf39Q8K2Z2 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Prpf39Q8K2Z2 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Prpf39Q8K2Z2 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Prpf39Q8K2Z2 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Prpf39Q8K2Z2 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Prpf39Q8K2Z2 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Prpf39Q8K2Z2 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Prpf39Q8K2Z2 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Prpf39Q8K2Z2 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Prpf39Q8K2Z2 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Prpf39Q8K2Z2 Gm42778-201ENSMUST00000199644 553 ntBASIC19.61■□□□□ 0.73
Prpf39Q8K2Z2 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Prpf39Q8K2Z2 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Prpf39Q8K2Z2 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Prpf39Q8K2Z2 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Prpf39Q8K2Z2 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Prpf39Q8K2Z2 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
Prpf39Q8K2Z2 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms