Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CopaQ8CIE6 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CopaQ8CIE6 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CopaQ8CIE6 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CopaQ8CIE6 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CopaQ8CIE6 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.28■□□□□ 0.68
CopaQ8CIE6 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CopaQ8CIE6 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CopaQ8CIE6 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CopaQ8CIE6 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CopaQ8CIE6 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CopaQ8CIE6 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CopaQ8CIE6 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.27■□□□□ 0.68
CopaQ8CIE6 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CopaQ8CIE6 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CopaQ8CIE6 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CopaQ8CIE6 Gm9988-201ENSMUST00000069786 435 ntBASIC19.27■□□□□ 0.68
CopaQ8CIE6 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CopaQ8CIE6 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
CopaQ8CIE6 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
CopaQ8CIE6 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.67
CopaQ8CIE6 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CopaQ8CIE6 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CopaQ8CIE6 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CopaQ8CIE6 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CopaQ8CIE6 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CopaQ8CIE6 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CopaQ8CIE6 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CopaQ8CIE6 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.26■□□□□ 0.67
CopaQ8CIE6 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CopaQ8CIE6 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CopaQ8CIE6 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.26■□□□□ 0.67
CopaQ8CIE6 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.26■□□□□ 0.67
CopaQ8CIE6 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CopaQ8CIE6 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CopaQ8CIE6 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CopaQ8CIE6 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CopaQ8CIE6 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CopaQ8CIE6 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.25■□□□□ 0.67
CopaQ8CIE6 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CopaQ8CIE6 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.25■□□□□ 0.67
CopaQ8CIE6 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.25■□□□□ 0.67
CopaQ8CIE6 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CopaQ8CIE6 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CopaQ8CIE6 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CopaQ8CIE6 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CopaQ8CIE6 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CopaQ8CIE6 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.25■□□□□ 0.67
CopaQ8CIE6 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CopaQ8CIE6 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CopaQ8CIE6 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CopaQ8CIE6 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.25■□□□□ 0.67
CopaQ8CIE6 Gm27801-201ENSMUST00000184174 223 ntBASIC19.25■□□□□ 0.67
CopaQ8CIE6 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CopaQ8CIE6 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CopaQ8CIE6 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CopaQ8CIE6 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CopaQ8CIE6 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.24■□□□□ 0.67
CopaQ8CIE6 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CopaQ8CIE6 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
CopaQ8CIE6 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CopaQ8CIE6 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CopaQ8CIE6 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CopaQ8CIE6 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.24■□□□□ 0.67
CopaQ8CIE6 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CopaQ8CIE6 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CopaQ8CIE6 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CopaQ8CIE6 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CopaQ8CIE6 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CopaQ8CIE6 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.23■□□□□ 0.67
CopaQ8CIE6 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CopaQ8CIE6 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CopaQ8CIE6 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CopaQ8CIE6 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.23■□□□□ 0.67
CopaQ8CIE6 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.23■□□□□ 0.67
CopaQ8CIE6 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.23■□□□□ 0.67
CopaQ8CIE6 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.23■□□□□ 0.67
CopaQ8CIE6 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CopaQ8CIE6 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CopaQ8CIE6 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CopaQ8CIE6 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CopaQ8CIE6 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CopaQ8CIE6 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.23■□□□□ 0.67
CopaQ8CIE6 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CopaQ8CIE6 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CopaQ8CIE6 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CopaQ8CIE6 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CopaQ8CIE6 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CopaQ8CIE6 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CopaQ8CIE6 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CopaQ8CIE6 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CopaQ8CIE6 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.22■□□□□ 0.67
CopaQ8CIE6 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CopaQ8CIE6 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CopaQ8CIE6 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CopaQ8CIE6 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CopaQ8CIE6 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CopaQ8CIE6 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CopaQ8CIE6 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CopaQ8CIE6 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms