Protein–RNA interactions for Protein: Q8CI51

Pdlim5, PDZ and LIM domain protein 5, mousemouse

Known RBP Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5Q8CI51 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Pdlim5Q8CI51 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.45■□□□□ 0.38
Pdlim5Q8CI51 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC17.45■□□□□ 0.38
Pdlim5Q8CI51 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pdlim5Q8CI51 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pdlim5Q8CI51 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.45■□□□□ 0.38
Pdlim5Q8CI51 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pdlim5Q8CI51 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pdlim5Q8CI51 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pdlim5Q8CI51 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.44■□□□□ 0.38
Pdlim5Q8CI51 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pdlim5Q8CI51 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pdlim5Q8CI51 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.44■□□□□ 0.38
Pdlim5Q8CI51 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC17.44■□□□□ 0.38
Pdlim5Q8CI51 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.44■□□□□ 0.38
Pdlim5Q8CI51 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pdlim5Q8CI51 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pdlim5Q8CI51 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pdlim5Q8CI51 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Pdlim5Q8CI51 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pdlim5Q8CI51 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pdlim5Q8CI51 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pdlim5Q8CI51 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pdlim5Q8CI51 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pdlim5Q8CI51 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pdlim5Q8CI51 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pdlim5Q8CI51 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.43■□□□□ 0.38
Pdlim5Q8CI51 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pdlim5Q8CI51 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.43■□□□□ 0.38
Pdlim5Q8CI51 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pdlim5Q8CI51 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pdlim5Q8CI51 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pdlim5Q8CI51 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Pdlim5Q8CI51 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pdlim5Q8CI51 Gm43173-201ENSMUST00000202246 593 ntBASIC17.43■□□□□ 0.38
Pdlim5Q8CI51 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.43■□□□□ 0.38
Pdlim5Q8CI51 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pdlim5Q8CI51 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pdlim5Q8CI51 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pdlim5Q8CI51 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Pdlim5Q8CI51 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pdlim5Q8CI51 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pdlim5Q8CI51 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pdlim5Q8CI51 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pdlim5Q8CI51 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pdlim5Q8CI51 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.42■□□□□ 0.38
Pdlim5Q8CI51 Gm8493-201ENSMUST00000196881 489 ntBASIC17.42■□□□□ 0.38
Pdlim5Q8CI51 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.42■□□□□ 0.38
Pdlim5Q8CI51 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pdlim5Q8CI51 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pdlim5Q8CI51 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pdlim5Q8CI51 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.42■□□□□ 0.38
Pdlim5Q8CI51 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pdlim5Q8CI51 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pdlim5Q8CI51 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pdlim5Q8CI51 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pdlim5Q8CI51 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Pdlim5Q8CI51 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pdlim5Q8CI51 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pdlim5Q8CI51 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pdlim5Q8CI51 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pdlim5Q8CI51 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pdlim5Q8CI51 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pdlim5Q8CI51 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pdlim5Q8CI51 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pdlim5Q8CI51 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pdlim5Q8CI51 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.41■□□□□ 0.38
Pdlim5Q8CI51 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pdlim5Q8CI51 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pdlim5Q8CI51 Gm27454-201ENSMUST00000185090 204 ntBASIC17.41■□□□□ 0.38
Pdlim5Q8CI51 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.41■□□□□ 0.38
Pdlim5Q8CI51 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pdlim5Q8CI51 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Pdlim5Q8CI51 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pdlim5Q8CI51 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pdlim5Q8CI51 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pdlim5Q8CI51 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pdlim5Q8CI51 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Pdlim5Q8CI51 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pdlim5Q8CI51 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pdlim5Q8CI51 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pdlim5Q8CI51 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pdlim5Q8CI51 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Pdlim5Q8CI51 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.4■□□□□ 0.38
Pdlim5Q8CI51 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pdlim5Q8CI51 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Pdlim5Q8CI51 Gm11421-201ENSMUST00000122124 294 ntBASIC17.4■□□□□ 0.38
Pdlim5Q8CI51 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
Pdlim5Q8CI51 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pdlim5Q8CI51 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pdlim5Q8CI51 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pdlim5Q8CI51 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pdlim5Q8CI51 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pdlim5Q8CI51 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pdlim5Q8CI51 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
Pdlim5Q8CI51 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pdlim5Q8CI51 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pdlim5Q8CI51 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pdlim5Q8CI51 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pdlim5Q8CI51 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms