Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vcpip1Q8CDG3 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vcpip1Q8CDG3 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Vcpip1Q8CDG3 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vcpip1Q8CDG3 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Vcpip1Q8CDG3 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vcpip1Q8CDG3 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Vcpip1Q8CDG3 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Vcpip1Q8CDG3 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vcpip1Q8CDG3 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vcpip1Q8CDG3 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Vcpip1Q8CDG3 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Vcpip1Q8CDG3 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vcpip1Q8CDG3 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.35■□□□□ 0.85
Vcpip1Q8CDG3 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Vcpip1Q8CDG3 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Vcpip1Q8CDG3 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vcpip1Q8CDG3 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Vcpip1Q8CDG3 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vcpip1Q8CDG3 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vcpip1Q8CDG3 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vcpip1Q8CDG3 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vcpip1Q8CDG3 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.34■□□□□ 0.85
Vcpip1Q8CDG3 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vcpip1Q8CDG3 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Vcpip1Q8CDG3 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vcpip1Q8CDG3 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Vcpip1Q8CDG3 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vcpip1Q8CDG3 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vcpip1Q8CDG3 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Vcpip1Q8CDG3 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Vcpip1Q8CDG3 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Vcpip1Q8CDG3 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Vcpip1Q8CDG3 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Vcpip1Q8CDG3 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Vcpip1Q8CDG3 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Vcpip1Q8CDG3 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Vcpip1Q8CDG3 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vcpip1Q8CDG3 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vcpip1Q8CDG3 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vcpip1Q8CDG3 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vcpip1Q8CDG3 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vcpip1Q8CDG3 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.32■□□□□ 0.84
Vcpip1Q8CDG3 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.32■□□□□ 0.84
Vcpip1Q8CDG3 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.32■□□□□ 0.84
Vcpip1Q8CDG3 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vcpip1Q8CDG3 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vcpip1Q8CDG3 Gm5953-201ENSMUST00000220644 2616 ntBASIC20.32■□□□□ 0.84
Vcpip1Q8CDG3 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vcpip1Q8CDG3 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vcpip1Q8CDG3 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Vcpip1Q8CDG3 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vcpip1Q8CDG3 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vcpip1Q8CDG3 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vcpip1Q8CDG3 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vcpip1Q8CDG3 Mir7075-201ENSMUST00000184187 82 ntBASIC20.31■□□□□ 0.84
Vcpip1Q8CDG3 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vcpip1Q8CDG3 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vcpip1Q8CDG3 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.31■□□□□ 0.84
Vcpip1Q8CDG3 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vcpip1Q8CDG3 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Vcpip1Q8CDG3 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vcpip1Q8CDG3 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Vcpip1Q8CDG3 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.3■□□□□ 0.84
Vcpip1Q8CDG3 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vcpip1Q8CDG3 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
Vcpip1Q8CDG3 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vcpip1Q8CDG3 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Vcpip1Q8CDG3 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vcpip1Q8CDG3 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vcpip1Q8CDG3 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vcpip1Q8CDG3 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vcpip1Q8CDG3 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vcpip1Q8CDG3 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vcpip1Q8CDG3 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vcpip1Q8CDG3 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vcpip1Q8CDG3 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vcpip1Q8CDG3 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vcpip1Q8CDG3 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Vcpip1Q8CDG3 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.29■□□□□ 0.84
Vcpip1Q8CDG3 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.29■□□□□ 0.84
Vcpip1Q8CDG3 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Vcpip1Q8CDG3 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vcpip1Q8CDG3 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Vcpip1Q8CDG3 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vcpip1Q8CDG3 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Vcpip1Q8CDG3 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vcpip1Q8CDG3 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vcpip1Q8CDG3 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vcpip1Q8CDG3 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vcpip1Q8CDG3 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Vcpip1Q8CDG3 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Vcpip1Q8CDG3 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Vcpip1Q8CDG3 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vcpip1Q8CDG3 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Vcpip1Q8CDG3 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vcpip1Q8CDG3 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vcpip1Q8CDG3 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Vcpip1Q8CDG3 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.28■□□□□ 0.84
Vcpip1Q8CDG3 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms