Protein–RNA interactions for Protein: Q8C7D3

Pabpc5, Poly A binding protein, cytoplasmic 5, mousemouse

Known RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpc5Q8C7D3 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pabpc5Q8C7D3 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Pabpc5Q8C7D3 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.97■□□□□ 0.63
Pabpc5Q8C7D3 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Pabpc5Q8C7D3 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pabpc5Q8C7D3 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pabpc5Q8C7D3 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Pabpc5Q8C7D3 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Pabpc5Q8C7D3 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pabpc5Q8C7D3 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.97■□□□□ 0.63
Pabpc5Q8C7D3 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Pabpc5Q8C7D3 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pabpc5Q8C7D3 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Pabpc5Q8C7D3 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Pabpc5Q8C7D3 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pabpc5Q8C7D3 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pabpc5Q8C7D3 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Pabpc5Q8C7D3 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Pabpc5Q8C7D3 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.96■□□□□ 0.63
Pabpc5Q8C7D3 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.96■□□□□ 0.63
Pabpc5Q8C7D3 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.96■□□□□ 0.63
Pabpc5Q8C7D3 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Pabpc5Q8C7D3 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pabpc5Q8C7D3 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.96■□□□□ 0.63
Pabpc5Q8C7D3 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pabpc5Q8C7D3 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Pabpc5Q8C7D3 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Pabpc5Q8C7D3 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pabpc5Q8C7D3 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Pabpc5Q8C7D3 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Pabpc5Q8C7D3 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.95■□□□□ 0.62
Pabpc5Q8C7D3 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pabpc5Q8C7D3 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pabpc5Q8C7D3 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pabpc5Q8C7D3 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pabpc5Q8C7D3 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pabpc5Q8C7D3 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pabpc5Q8C7D3 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pabpc5Q8C7D3 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pabpc5Q8C7D3 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pabpc5Q8C7D3 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pabpc5Q8C7D3 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pabpc5Q8C7D3 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pabpc5Q8C7D3 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.94■□□□□ 0.62
Pabpc5Q8C7D3 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.94■□□□□ 0.62
Pabpc5Q8C7D3 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
Pabpc5Q8C7D3 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.94■□□□□ 0.62
Pabpc5Q8C7D3 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
Pabpc5Q8C7D3 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pabpc5Q8C7D3 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.94■□□□□ 0.62
Pabpc5Q8C7D3 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pabpc5Q8C7D3 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pabpc5Q8C7D3 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Pabpc5Q8C7D3 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Pabpc5Q8C7D3 Reep4-203ENSMUST00000226563 1444 ntBASIC18.93■□□□□ 0.62
Pabpc5Q8C7D3 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Pabpc5Q8C7D3 Gm13234-201ENSMUST00000120010 747 ntBASIC18.93■□□□□ 0.62
Pabpc5Q8C7D3 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.93■□□□□ 0.62
Pabpc5Q8C7D3 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Pabpc5Q8C7D3 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.93■□□□□ 0.62
Pabpc5Q8C7D3 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Pabpc5Q8C7D3 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Pabpc5Q8C7D3 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pabpc5Q8C7D3 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.93■□□□□ 0.62
Pabpc5Q8C7D3 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pabpc5Q8C7D3 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.92■□□□□ 0.62
Pabpc5Q8C7D3 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.92■□□□□ 0.62
Pabpc5Q8C7D3 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pabpc5Q8C7D3 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Pabpc5Q8C7D3 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Pabpc5Q8C7D3 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Pabpc5Q8C7D3 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.92■□□□□ 0.62
Pabpc5Q8C7D3 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pabpc5Q8C7D3 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pabpc5Q8C7D3 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pabpc5Q8C7D3 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pabpc5Q8C7D3 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pabpc5Q8C7D3 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pabpc5Q8C7D3 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pabpc5Q8C7D3 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pabpc5Q8C7D3 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pabpc5Q8C7D3 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.9■□□□□ 0.62
Pabpc5Q8C7D3 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Pabpc5Q8C7D3 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pabpc5Q8C7D3 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pabpc5Q8C7D3 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.9■□□□□ 0.62
Pabpc5Q8C7D3 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pabpc5Q8C7D3 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pabpc5Q8C7D3 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pabpc5Q8C7D3 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pabpc5Q8C7D3 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pabpc5Q8C7D3 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.9■□□□□ 0.62
Pabpc5Q8C7D3 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Pabpc5Q8C7D3 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Pabpc5Q8C7D3 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Pabpc5Q8C7D3 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pabpc5Q8C7D3 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.89■□□□□ 0.61
Pabpc5Q8C7D3 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.89■□□□□ 0.61
Pabpc5Q8C7D3 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Pabpc5Q8C7D3 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms