Protein–RNA interactions for Protein: Q8C552

Fam78a, Protein FAM78A, mousemouse

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam78aQ8C552 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Fam78aQ8C552 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Fam78aQ8C552 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Fam78aQ8C552 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Fam78aQ8C552 Gm12896-201ENSMUST00000118430 226 ntBASIC20.23■□□□□ 0.83
Fam78aQ8C552 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Fam78aQ8C552 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Fam78aQ8C552 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
Fam78aQ8C552 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Fam78aQ8C552 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Fam78aQ8C552 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Fam78aQ8C552 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Fam78aQ8C552 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Fam78aQ8C552 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Fam78aQ8C552 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Fam78aQ8C552 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Fam78aQ8C552 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Fam78aQ8C552 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC20.22■□□□□ 0.83
Fam78aQ8C552 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Fam78aQ8C552 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Fam78aQ8C552 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Fam78aQ8C552 Gm10812-201ENSMUST00000099864 546 ntBASIC20.22■□□□□ 0.83
Fam78aQ8C552 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Fam78aQ8C552 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Fam78aQ8C552 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Fam78aQ8C552 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Fam78aQ8C552 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.22■□□□□ 0.83
Fam78aQ8C552 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Fam78aQ8C552 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Fam78aQ8C552 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Fam78aQ8C552 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Fam78aQ8C552 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Fam78aQ8C552 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Fam78aQ8C552 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Fam78aQ8C552 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Fam78aQ8C552 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Fam78aQ8C552 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Fam78aQ8C552 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Fam78aQ8C552 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Fam78aQ8C552 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Fam78aQ8C552 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Fam78aQ8C552 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Fam78aQ8C552 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Fam78aQ8C552 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Fam78aQ8C552 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Fam78aQ8C552 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Fam78aQ8C552 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Fam78aQ8C552 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Fam78aQ8C552 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Fam78aQ8C552 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC20.2■□□□□ 0.82
Fam78aQ8C552 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Fam78aQ8C552 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC20.2■□□□□ 0.82
Fam78aQ8C552 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.2■□□□□ 0.82
Fam78aQ8C552 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC20.2■□□□□ 0.82
Fam78aQ8C552 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Fam78aQ8C552 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.2■□□□□ 0.82
Fam78aQ8C552 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Fam78aQ8C552 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Fam78aQ8C552 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Fam78aQ8C552 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC20.19■□□□□ 0.82
Fam78aQ8C552 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Fam78aQ8C552 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Fam78aQ8C552 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Fam78aQ8C552 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Fam78aQ8C552 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Fam78aQ8C552 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Fam78aQ8C552 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Fam78aQ8C552 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Fam78aQ8C552 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Fam78aQ8C552 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Fam78aQ8C552 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Fam78aQ8C552 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC20.18■□□□□ 0.82
Fam78aQ8C552 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Fam78aQ8C552 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Fam78aQ8C552 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Fam78aQ8C552 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Fam78aQ8C552 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Fam78aQ8C552 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Fam78aQ8C552 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Fam78aQ8C552 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Fam78aQ8C552 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Fam78aQ8C552 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Fam78aQ8C552 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Fam78aQ8C552 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.16■□□□□ 0.82
Fam78aQ8C552 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC20.16■□□□□ 0.82
Fam78aQ8C552 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Fam78aQ8C552 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.16■□□□□ 0.82
Fam78aQ8C552 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.16■□□□□ 0.82
Fam78aQ8C552 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Fam78aQ8C552 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Fam78aQ8C552 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC20.16■□□□□ 0.82
Fam78aQ8C552 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.16■□□□□ 0.82
Fam78aQ8C552 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Fam78aQ8C552 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Fam78aQ8C552 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Fam78aQ8C552 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Fam78aQ8C552 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Fam78aQ8C552 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Fam78aQ8C552 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC20.15■□□□□ 0.82
Fam78aQ8C552 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms