Protein–RNA interactions for Protein: Q8C4H2

Samd3, Sterile alpha motif domain-containing protein 3, mousemouse

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samd3Q8C4H2 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Samd3Q8C4H2 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Samd3Q8C4H2 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Samd3Q8C4H2 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Samd3Q8C4H2 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Samd3Q8C4H2 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Samd3Q8C4H2 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Samd3Q8C4H2 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Samd3Q8C4H2 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Samd3Q8C4H2 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Samd3Q8C4H2 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Samd3Q8C4H2 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Samd3Q8C4H2 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Samd3Q8C4H2 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Samd3Q8C4H2 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.64■□□□□ 0.73
Samd3Q8C4H2 Gm6211-202ENSMUST00000167849 925 ntBASIC19.64■□□□□ 0.73
Samd3Q8C4H2 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Samd3Q8C4H2 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.64■□□□□ 0.73
Samd3Q8C4H2 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.64■□□□□ 0.73
Samd3Q8C4H2 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
Samd3Q8C4H2 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.64■□□□□ 0.73
Samd3Q8C4H2 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.64■□□□□ 0.73
Samd3Q8C4H2 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Samd3Q8C4H2 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Samd3Q8C4H2 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Samd3Q8C4H2 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Samd3Q8C4H2 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Samd3Q8C4H2 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Samd3Q8C4H2 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Samd3Q8C4H2 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Samd3Q8C4H2 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Samd3Q8C4H2 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Samd3Q8C4H2 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Samd3Q8C4H2 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
Samd3Q8C4H2 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Samd3Q8C4H2 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Samd3Q8C4H2 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Samd3Q8C4H2 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Samd3Q8C4H2 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Samd3Q8C4H2 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Samd3Q8C4H2 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.62■□□□□ 0.73
Samd3Q8C4H2 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Samd3Q8C4H2 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Samd3Q8C4H2 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Samd3Q8C4H2 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Samd3Q8C4H2 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Samd3Q8C4H2 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Samd3Q8C4H2 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.62■□□□□ 0.73
Samd3Q8C4H2 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.62■□□□□ 0.73
Samd3Q8C4H2 Gm4968-201ENSMUST00000071458 858 ntBASIC19.62■□□□□ 0.73
Samd3Q8C4H2 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Samd3Q8C4H2 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Samd3Q8C4H2 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Samd3Q8C4H2 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Samd3Q8C4H2 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Samd3Q8C4H2 Gm12441-201ENSMUST00000121806 588 ntBASIC19.61■□□□□ 0.73
Samd3Q8C4H2 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.61■□□□□ 0.73
Samd3Q8C4H2 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Samd3Q8C4H2 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Samd3Q8C4H2 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Samd3Q8C4H2 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.61■□□□□ 0.73
Samd3Q8C4H2 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Samd3Q8C4H2 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Samd3Q8C4H2 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Samd3Q8C4H2 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Samd3Q8C4H2 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Samd3Q8C4H2 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.6■□□□□ 0.73
Samd3Q8C4H2 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Samd3Q8C4H2 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Samd3Q8C4H2 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Samd3Q8C4H2 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Samd3Q8C4H2 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Samd3Q8C4H2 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.59■□□□□ 0.73
Samd3Q8C4H2 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Samd3Q8C4H2 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Samd3Q8C4H2 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Samd3Q8C4H2 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.59■□□□□ 0.73
Samd3Q8C4H2 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Samd3Q8C4H2 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Samd3Q8C4H2 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Samd3Q8C4H2 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
Samd3Q8C4H2 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Samd3Q8C4H2 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Samd3Q8C4H2 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Samd3Q8C4H2 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Samd3Q8C4H2 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Samd3Q8C4H2 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Samd3Q8C4H2 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Samd3Q8C4H2 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Samd3Q8C4H2 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Samd3Q8C4H2 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Samd3Q8C4H2 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Samd3Q8C4H2 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.58■□□□□ 0.72
Samd3Q8C4H2 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.58■□□□□ 0.72
Samd3Q8C4H2 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Samd3Q8C4H2 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Samd3Q8C4H2 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Samd3Q8C4H2 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Samd3Q8C4H2 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Samd3Q8C4H2 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms