Protein–RNA interactions for Protein: Q8C3Q5

Shisa7, Protein shisa-7, mousemouse

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa7Q8C3Q5 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Shisa7Q8C3Q5 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Shisa7Q8C3Q5 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Shisa7Q8C3Q5 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.26■□□□□ 0.51
Shisa7Q8C3Q5 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.26■□□□□ 0.51
Shisa7Q8C3Q5 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Shisa7Q8C3Q5 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Shisa7Q8C3Q5 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.26■□□□□ 0.51
Shisa7Q8C3Q5 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Shisa7Q8C3Q5 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Shisa7Q8C3Q5 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Shisa7Q8C3Q5 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Shisa7Q8C3Q5 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Shisa7Q8C3Q5 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Shisa7Q8C3Q5 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Shisa7Q8C3Q5 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Shisa7Q8C3Q5 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Shisa7Q8C3Q5 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Shisa7Q8C3Q5 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Shisa7Q8C3Q5 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Shisa7Q8C3Q5 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Shisa7Q8C3Q5 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Shisa7Q8C3Q5 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Shisa7Q8C3Q5 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Shisa7Q8C3Q5 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Shisa7Q8C3Q5 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Shisa7Q8C3Q5 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Shisa7Q8C3Q5 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
Shisa7Q8C3Q5 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Shisa7Q8C3Q5 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.25■□□□□ 0.51
Shisa7Q8C3Q5 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Shisa7Q8C3Q5 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Shisa7Q8C3Q5 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Shisa7Q8C3Q5 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Shisa7Q8C3Q5 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Shisa7Q8C3Q5 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Shisa7Q8C3Q5 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Shisa7Q8C3Q5 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Shisa7Q8C3Q5 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Shisa7Q8C3Q5 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Shisa7Q8C3Q5 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.24■□□□□ 0.51
Shisa7Q8C3Q5 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Shisa7Q8C3Q5 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.24■□□□□ 0.51
Shisa7Q8C3Q5 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Shisa7Q8C3Q5 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Shisa7Q8C3Q5 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Shisa7Q8C3Q5 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Shisa7Q8C3Q5 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Shisa7Q8C3Q5 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Shisa7Q8C3Q5 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Shisa7Q8C3Q5 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Shisa7Q8C3Q5 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.23■□□□□ 0.51
Shisa7Q8C3Q5 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Shisa7Q8C3Q5 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.23■□□□□ 0.51
Shisa7Q8C3Q5 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Shisa7Q8C3Q5 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.23■□□□□ 0.51
Shisa7Q8C3Q5 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Shisa7Q8C3Q5 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Shisa7Q8C3Q5 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Shisa7Q8C3Q5 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Shisa7Q8C3Q5 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shisa7Q8C3Q5 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shisa7Q8C3Q5 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shisa7Q8C3Q5 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shisa7Q8C3Q5 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shisa7Q8C3Q5 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Shisa7Q8C3Q5 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shisa7Q8C3Q5 Gm6211-202ENSMUST00000167849 925 ntBASIC18.22■□□□□ 0.51
Shisa7Q8C3Q5 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shisa7Q8C3Q5 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shisa7Q8C3Q5 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shisa7Q8C3Q5 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shisa7Q8C3Q5 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Shisa7Q8C3Q5 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Shisa7Q8C3Q5 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Shisa7Q8C3Q5 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Shisa7Q8C3Q5 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Shisa7Q8C3Q5 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
Shisa7Q8C3Q5 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Shisa7Q8C3Q5 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Shisa7Q8C3Q5 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Shisa7Q8C3Q5 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Shisa7Q8C3Q5 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.21■□□□□ 0.51
Shisa7Q8C3Q5 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Shisa7Q8C3Q5 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Shisa7Q8C3Q5 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Shisa7Q8C3Q5 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Shisa7Q8C3Q5 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Shisa7Q8C3Q5 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Shisa7Q8C3Q5 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Shisa7Q8C3Q5 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Shisa7Q8C3Q5 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Shisa7Q8C3Q5 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.2■□□□□ 0.5
Shisa7Q8C3Q5 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.2■□□□□ 0.5
Shisa7Q8C3Q5 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.2■□□□□ 0.5
Shisa7Q8C3Q5 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Shisa7Q8C3Q5 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Shisa7Q8C3Q5 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.2■□□□□ 0.5
Shisa7Q8C3Q5 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Shisa7Q8C3Q5 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms