Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tsen54Q8C2A2 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tsen54Q8C2A2 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Tsen54Q8C2A2 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tsen54Q8C2A2 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tsen54Q8C2A2 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tsen54Q8C2A2 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Tsen54Q8C2A2 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Tsen54Q8C2A2 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Tsen54Q8C2A2 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Tsen54Q8C2A2 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Tsen54Q8C2A2 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tsen54Q8C2A2 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC15.83■□□□□ 0.12
Tsen54Q8C2A2 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Tsen54Q8C2A2 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC15.83■□□□□ 0.12
Tsen54Q8C2A2 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tsen54Q8C2A2 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tsen54Q8C2A2 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC15.83■□□□□ 0.12
Tsen54Q8C2A2 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tsen54Q8C2A2 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Tsen54Q8C2A2 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tsen54Q8C2A2 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tsen54Q8C2A2 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC15.83■□□□□ 0.12
Tsen54Q8C2A2 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tsen54Q8C2A2 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Tsen54Q8C2A2 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tsen54Q8C2A2 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tsen54Q8C2A2 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tsen54Q8C2A2 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tsen54Q8C2A2 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tsen54Q8C2A2 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tsen54Q8C2A2 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Tsen54Q8C2A2 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC15.82■□□□□ 0.12
Tsen54Q8C2A2 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Tsen54Q8C2A2 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Tsen54Q8C2A2 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tsen54Q8C2A2 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tsen54Q8C2A2 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tsen54Q8C2A2 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tsen54Q8C2A2 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tsen54Q8C2A2 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Tsen54Q8C2A2 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tsen54Q8C2A2 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tsen54Q8C2A2 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tsen54Q8C2A2 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Tsen54Q8C2A2 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Tsen54Q8C2A2 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tsen54Q8C2A2 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Tsen54Q8C2A2 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Tsen54Q8C2A2 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tsen54Q8C2A2 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Tsen54Q8C2A2 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC15.81■□□□□ 0.12
Tsen54Q8C2A2 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC15.81■□□□□ 0.12
Tsen54Q8C2A2 AC166356.1-201ENSMUST00000228236 1426 ntBASIC15.81■□□□□ 0.12
Tsen54Q8C2A2 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tsen54Q8C2A2 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tsen54Q8C2A2 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tsen54Q8C2A2 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tsen54Q8C2A2 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Tsen54Q8C2A2 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Tsen54Q8C2A2 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tsen54Q8C2A2 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tsen54Q8C2A2 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tsen54Q8C2A2 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tsen54Q8C2A2 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tsen54Q8C2A2 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tsen54Q8C2A2 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tsen54Q8C2A2 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tsen54Q8C2A2 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Tsen54Q8C2A2 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Tsen54Q8C2A2 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tsen54Q8C2A2 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tsen54Q8C2A2 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tsen54Q8C2A2 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tsen54Q8C2A2 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tsen54Q8C2A2 Gm37811-201ENSMUST00000192416 2601 ntBASIC15.8■□□□□ 0.12
Tsen54Q8C2A2 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tsen54Q8C2A2 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Tsen54Q8C2A2 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tsen54Q8C2A2 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Tsen54Q8C2A2 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tsen54Q8C2A2 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tsen54Q8C2A2 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Tsen54Q8C2A2 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tsen54Q8C2A2 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tsen54Q8C2A2 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tsen54Q8C2A2 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Tsen54Q8C2A2 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tsen54Q8C2A2 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tsen54Q8C2A2 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tsen54Q8C2A2 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Tsen54Q8C2A2 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tsen54Q8C2A2 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC15.78■□□□□ 0.12
Tsen54Q8C2A2 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tsen54Q8C2A2 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC15.78■□□□□ 0.12
Tsen54Q8C2A2 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tsen54Q8C2A2 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC15.78■□□□□ 0.12
Tsen54Q8C2A2 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tsen54Q8C2A2 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Tsen54Q8C2A2 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms