Protein–RNA interactions for Protein: Q8BV79

Trank1, TPR and ankyrin repeat-containing protein 1, mousemouse

Predictions only

Length 2,999 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trank1Q8BV79 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trank1Q8BV79 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trank1Q8BV79 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trank1Q8BV79 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trank1Q8BV79 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trank1Q8BV79 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.57■□□□□ 0.24
Trank1Q8BV79 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trank1Q8BV79 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC16.57■□□□□ 0.24
Trank1Q8BV79 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trank1Q8BV79 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trank1Q8BV79 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trank1Q8BV79 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trank1Q8BV79 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trank1Q8BV79 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trank1Q8BV79 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trank1Q8BV79 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Trank1Q8BV79 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trank1Q8BV79 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trank1Q8BV79 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Trank1Q8BV79 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trank1Q8BV79 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
Trank1Q8BV79 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trank1Q8BV79 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trank1Q8BV79 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Trank1Q8BV79 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.55■□□□□ 0.24
Trank1Q8BV79 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.55■□□□□ 0.24
Trank1Q8BV79 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.55■□□□□ 0.24
Trank1Q8BV79 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trank1Q8BV79 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.55■□□□□ 0.24
Trank1Q8BV79 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trank1Q8BV79 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trank1Q8BV79 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trank1Q8BV79 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trank1Q8BV79 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trank1Q8BV79 Gm18666-201ENSMUST00000190039 958 ntBASIC16.55■□□□□ 0.24
Trank1Q8BV79 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trank1Q8BV79 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trank1Q8BV79 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trank1Q8BV79 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.54■□□□□ 0.24
Trank1Q8BV79 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC16.54■□□□□ 0.24
Trank1Q8BV79 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trank1Q8BV79 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
Trank1Q8BV79 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trank1Q8BV79 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trank1Q8BV79 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.54■□□□□ 0.24
Trank1Q8BV79 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trank1Q8BV79 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trank1Q8BV79 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trank1Q8BV79 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trank1Q8BV79 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trank1Q8BV79 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trank1Q8BV79 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trank1Q8BV79 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.53■□□□□ 0.24
Trank1Q8BV79 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.53■□□□□ 0.24
Trank1Q8BV79 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trank1Q8BV79 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trank1Q8BV79 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trank1Q8BV79 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trank1Q8BV79 Gm10517-202ENSMUST00000192970 758 ntBASIC16.53■□□□□ 0.24
Trank1Q8BV79 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16.53■□□□□ 0.24
Trank1Q8BV79 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trank1Q8BV79 Gm17641-201ENSMUST00000166328 2350 ntBASIC16.53■□□□□ 0.24
Trank1Q8BV79 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trank1Q8BV79 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
Trank1Q8BV79 Gm43799-201ENSMUST00000201845 579 ntBASIC16.53■□□□□ 0.24
Trank1Q8BV79 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Trank1Q8BV79 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trank1Q8BV79 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trank1Q8BV79 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trank1Q8BV79 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.52■□□□□ 0.24
Trank1Q8BV79 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Trank1Q8BV79 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trank1Q8BV79 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trank1Q8BV79 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trank1Q8BV79 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.52■□□□□ 0.23
Trank1Q8BV79 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trank1Q8BV79 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.52■□□□□ 0.23
Trank1Q8BV79 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trank1Q8BV79 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trank1Q8BV79 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.52■□□□□ 0.23
Trank1Q8BV79 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trank1Q8BV79 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trank1Q8BV79 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trank1Q8BV79 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trank1Q8BV79 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Trank1Q8BV79 Gm21362-201ENSMUST00000194272 928 ntBASIC16.51■□□□□ 0.23
Trank1Q8BV79 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Trank1Q8BV79 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Trank1Q8BV79 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trank1Q8BV79 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trank1Q8BV79 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trank1Q8BV79 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trank1Q8BV79 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC16.5■□□□□ 0.23
Trank1Q8BV79 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trank1Q8BV79 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trank1Q8BV79 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trank1Q8BV79 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Trank1Q8BV79 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trank1Q8BV79 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC16.5■□□□□ 0.23
Trank1Q8BV79 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms