Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cpne3Q8BT60 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cpne3Q8BT60 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Cpne3Q8BT60 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.26■□□□□ 0.51
Cpne3Q8BT60 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Cpne3Q8BT60 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Cpne3Q8BT60 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cpne3Q8BT60 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cpne3Q8BT60 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cpne3Q8BT60 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cpne3Q8BT60 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.26■□□□□ 0.51
Cpne3Q8BT60 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Cpne3Q8BT60 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cpne3Q8BT60 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cpne3Q8BT60 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cpne3Q8BT60 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Cpne3Q8BT60 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.26■□□□□ 0.51
Cpne3Q8BT60 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cpne3Q8BT60 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cpne3Q8BT60 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cpne3Q8BT60 Gm12251-201ENSMUST00000117893 792 ntBASIC18.25■□□□□ 0.51
Cpne3Q8BT60 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.25■□□□□ 0.51
Cpne3Q8BT60 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cpne3Q8BT60 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cpne3Q8BT60 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cpne3Q8BT60 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cpne3Q8BT60 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cpne3Q8BT60 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cpne3Q8BT60 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cpne3Q8BT60 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cpne3Q8BT60 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cpne3Q8BT60 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cpne3Q8BT60 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.24■□□□□ 0.51
Cpne3Q8BT60 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.24■□□□□ 0.51
Cpne3Q8BT60 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cpne3Q8BT60 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.24■□□□□ 0.51
Cpne3Q8BT60 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cpne3Q8BT60 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.24■□□□□ 0.51
Cpne3Q8BT60 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cpne3Q8BT60 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Cpne3Q8BT60 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cpne3Q8BT60 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cpne3Q8BT60 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cpne3Q8BT60 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cpne3Q8BT60 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cpne3Q8BT60 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cpne3Q8BT60 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cpne3Q8BT60 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cpne3Q8BT60 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Cpne3Q8BT60 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cpne3Q8BT60 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cpne3Q8BT60 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.23■□□□□ 0.51
Cpne3Q8BT60 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cpne3Q8BT60 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Cpne3Q8BT60 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cpne3Q8BT60 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cpne3Q8BT60 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cpne3Q8BT60 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
Cpne3Q8BT60 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cpne3Q8BT60 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cpne3Q8BT60 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cpne3Q8BT60 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cpne3Q8BT60 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cpne3Q8BT60 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Cpne3Q8BT60 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cpne3Q8BT60 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Cpne3Q8BT60 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Cpne3Q8BT60 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Cpne3Q8BT60 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cpne3Q8BT60 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cpne3Q8BT60 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cpne3Q8BT60 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cpne3Q8BT60 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cpne3Q8BT60 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cpne3Q8BT60 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cpne3Q8BT60 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cpne3Q8BT60 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cpne3Q8BT60 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Cpne3Q8BT60 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Cpne3Q8BT60 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cpne3Q8BT60 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cpne3Q8BT60 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cpne3Q8BT60 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cpne3Q8BT60 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cpne3Q8BT60 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cpne3Q8BT60 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cpne3Q8BT60 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cpne3Q8BT60 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.21■□□□□ 0.51
Cpne3Q8BT60 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cpne3Q8BT60 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cpne3Q8BT60 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.21■□□□□ 0.51
Cpne3Q8BT60 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cpne3Q8BT60 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.21■□□□□ 0.51
Cpne3Q8BT60 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cpne3Q8BT60 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cpne3Q8BT60 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cpne3Q8BT60 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cpne3Q8BT60 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cpne3Q8BT60 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.2■□□□□ 0.5
Cpne3Q8BT60 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms