Protein–RNA interactions for Protein: Q8BR37

Nhlrc1, E3 ubiquitin-protein ligase NHLRC1, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc1Q8BR37 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nhlrc1Q8BR37 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nhlrc1Q8BR37 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nhlrc1Q8BR37 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Nhlrc1Q8BR37 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nhlrc1Q8BR37 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nhlrc1Q8BR37 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC14.66□□□□□ -0.06
Nhlrc1Q8BR37 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nhlrc1Q8BR37 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Nhlrc1Q8BR37 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nhlrc1Q8BR37 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nhlrc1Q8BR37 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nhlrc1Q8BR37 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nhlrc1Q8BR37 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nhlrc1Q8BR37 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nhlrc1Q8BR37 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nhlrc1Q8BR37 Gm10655-201ENSMUST00000098658 1397 ntBASIC14.65□□□□□ -0.06
Nhlrc1Q8BR37 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
Nhlrc1Q8BR37 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nhlrc1Q8BR37 Gm13534-201ENSMUST00000121169 513 ntBASIC14.65□□□□□ -0.06
Nhlrc1Q8BR37 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nhlrc1Q8BR37 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC14.65□□□□□ -0.06
Nhlrc1Q8BR37 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC14.65□□□□□ -0.06
Nhlrc1Q8BR37 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC14.65□□□□□ -0.06
Nhlrc1Q8BR37 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Nhlrc1Q8BR37 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Nhlrc1Q8BR37 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Nhlrc1Q8BR37 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nhlrc1Q8BR37 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nhlrc1Q8BR37 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Nhlrc1Q8BR37 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
Nhlrc1Q8BR37 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC14.65□□□□□ -0.06
Nhlrc1Q8BR37 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Nhlrc1Q8BR37 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Nhlrc1Q8BR37 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nhlrc1Q8BR37 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nhlrc1Q8BR37 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Nhlrc1Q8BR37 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nhlrc1Q8BR37 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nhlrc1Q8BR37 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Nhlrc1Q8BR37 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC14.64□□□□□ -0.07
Nhlrc1Q8BR37 Gm38205-201ENSMUST00000192243 258 ntBASIC14.64□□□□□ -0.07
Nhlrc1Q8BR37 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nhlrc1Q8BR37 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nhlrc1Q8BR37 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nhlrc1Q8BR37 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Nhlrc1Q8BR37 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nhlrc1Q8BR37 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nhlrc1Q8BR37 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nhlrc1Q8BR37 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nhlrc1Q8BR37 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nhlrc1Q8BR37 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nhlrc1Q8BR37 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nhlrc1Q8BR37 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC14.63□□□□□ -0.07
Nhlrc1Q8BR37 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Nhlrc1Q8BR37 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nhlrc1Q8BR37 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nhlrc1Q8BR37 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Nhlrc1Q8BR37 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nhlrc1Q8BR37 Gm6365-201ENSMUST00000054711 744 ntBASIC14.63□□□□□ -0.07
Nhlrc1Q8BR37 Gm4968-201ENSMUST00000071458 858 ntBASIC14.63□□□□□ -0.07
Nhlrc1Q8BR37 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC14.63□□□□□ -0.07
Nhlrc1Q8BR37 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nhlrc1Q8BR37 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nhlrc1Q8BR37 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nhlrc1Q8BR37 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nhlrc1Q8BR37 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nhlrc1Q8BR37 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nhlrc1Q8BR37 Gm12504-201ENSMUST00000120860 2231 ntBASIC14.62□□□□□ -0.07
Nhlrc1Q8BR37 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nhlrc1Q8BR37 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nhlrc1Q8BR37 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nhlrc1Q8BR37 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nhlrc1Q8BR37 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
Nhlrc1Q8BR37 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nhlrc1Q8BR37 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nhlrc1Q8BR37 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC14.62□□□□□ -0.07
Nhlrc1Q8BR37 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC14.62□□□□□ -0.07
Nhlrc1Q8BR37 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC14.62□□□□□ -0.07
Nhlrc1Q8BR37 Gm43909-201ENSMUST00000203443 1876 ntBASIC14.62□□□□□ -0.07
Nhlrc1Q8BR37 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nhlrc1Q8BR37 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nhlrc1Q8BR37 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC14.62□□□□□ -0.07
Nhlrc1Q8BR37 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nhlrc1Q8BR37 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nhlrc1Q8BR37 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Nhlrc1Q8BR37 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Nhlrc1Q8BR37 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Nhlrc1Q8BR37 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nhlrc1Q8BR37 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nhlrc1Q8BR37 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nhlrc1Q8BR37 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nhlrc1Q8BR37 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Nhlrc1Q8BR37 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Nhlrc1Q8BR37 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nhlrc1Q8BR37 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nhlrc1Q8BR37 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nhlrc1Q8BR37 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nhlrc1Q8BR37 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nhlrc1Q8BR37 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms