Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Prpf18Q8BM39 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
Prpf18Q8BM39 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Prpf18Q8BM39 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Prpf18Q8BM39 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Prpf18Q8BM39 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Prpf18Q8BM39 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Prpf18Q8BM39 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Prpf18Q8BM39 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
Prpf18Q8BM39 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Prpf18Q8BM39 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Prpf18Q8BM39 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Prpf18Q8BM39 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Prpf18Q8BM39 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Prpf18Q8BM39 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.99■□□□□ 0.47
Prpf18Q8BM39 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Prpf18Q8BM39 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Prpf18Q8BM39 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Prpf18Q8BM39 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Prpf18Q8BM39 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.99■□□□□ 0.47
Prpf18Q8BM39 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Prpf18Q8BM39 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Prpf18Q8BM39 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Prpf18Q8BM39 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Prpf18Q8BM39 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.98■□□□□ 0.47
Prpf18Q8BM39 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.98■□□□□ 0.47
Prpf18Q8BM39 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Prpf18Q8BM39 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Prpf18Q8BM39 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Prpf18Q8BM39 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Prpf18Q8BM39 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Prpf18Q8BM39 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Prpf18Q8BM39 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Prpf18Q8BM39 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Prpf18Q8BM39 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Prpf18Q8BM39 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.97■□□□□ 0.47
Prpf18Q8BM39 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Prpf18Q8BM39 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Prpf18Q8BM39 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.97■□□□□ 0.47
Prpf18Q8BM39 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.97■□□□□ 0.47
Prpf18Q8BM39 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Prpf18Q8BM39 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Prpf18Q8BM39 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Prpf18Q8BM39 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Prpf18Q8BM39 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Prpf18Q8BM39 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Prpf18Q8BM39 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Prpf18Q8BM39 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Prpf18Q8BM39 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.97■□□□□ 0.47
Prpf18Q8BM39 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Prpf18Q8BM39 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Prpf18Q8BM39 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Prpf18Q8BM39 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Prpf18Q8BM39 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Prpf18Q8BM39 Grk6-206ENSMUST00000224995 2971 ntBASIC17.96■□□□□ 0.47
Prpf18Q8BM39 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Prpf18Q8BM39 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Prpf18Q8BM39 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Prpf18Q8BM39 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Prpf18Q8BM39 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Prpf18Q8BM39 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Prpf18Q8BM39 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Prpf18Q8BM39 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Prpf18Q8BM39 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf18Q8BM39 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf18Q8BM39 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.95■□□□□ 0.46
Prpf18Q8BM39 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf18Q8BM39 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf18Q8BM39 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf18Q8BM39 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
Prpf18Q8BM39 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf18Q8BM39 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf18Q8BM39 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.95■□□□□ 0.46
Prpf18Q8BM39 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC17.95■□□□□ 0.46
Prpf18Q8BM39 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Prpf18Q8BM39 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf18Q8BM39 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Prpf18Q8BM39 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Prpf18Q8BM39 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Prpf18Q8BM39 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Prpf18Q8BM39 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Prpf18Q8BM39 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Prpf18Q8BM39 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Prpf18Q8BM39 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Prpf18Q8BM39 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.94■□□□□ 0.46
Prpf18Q8BM39 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
Prpf18Q8BM39 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.94■□□□□ 0.46
Prpf18Q8BM39 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Prpf18Q8BM39 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Prpf18Q8BM39 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Prpf18Q8BM39 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Prpf18Q8BM39 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Prpf18Q8BM39 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Prpf18Q8BM39 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Prpf18Q8BM39 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Prpf18Q8BM39 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Prpf18Q8BM39 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Prpf18Q8BM39 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Prpf18Q8BM39 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Prpf18Q8BM39 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms