Protein–RNA interactions for Protein: Q8BJ37

Tdp1, Tyrosyl-DNA phosphodiesterase 1, mousemouse

Predictions only

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp1Q8BJ37 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tdp1Q8BJ37 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tdp1Q8BJ37 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Tdp1Q8BJ37 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC21.02■□□□□ 0.96
Tdp1Q8BJ37 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Tdp1Q8BJ37 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Tdp1Q8BJ37 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC21.02■□□□□ 0.96
Tdp1Q8BJ37 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tdp1Q8BJ37 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Tdp1Q8BJ37 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tdp1Q8BJ37 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tdp1Q8BJ37 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.95
Tdp1Q8BJ37 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Tdp1Q8BJ37 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tdp1Q8BJ37 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Tdp1Q8BJ37 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Tdp1Q8BJ37 Gm13181-201ENSMUST00000120117 1069 ntBASIC21.01■□□□□ 0.95
Tdp1Q8BJ37 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Tdp1Q8BJ37 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC21.01■□□□□ 0.95
Tdp1Q8BJ37 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tdp1Q8BJ37 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Tdp1Q8BJ37 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Tdp1Q8BJ37 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tdp1Q8BJ37 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tdp1Q8BJ37 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tdp1Q8BJ37 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC21■□□□□ 0.95
Tdp1Q8BJ37 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Tdp1Q8BJ37 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC21■□□□□ 0.95
Tdp1Q8BJ37 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC21■□□□□ 0.95
Tdp1Q8BJ37 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Tdp1Q8BJ37 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Tdp1Q8BJ37 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC21■□□□□ 0.95
Tdp1Q8BJ37 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Tdp1Q8BJ37 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tdp1Q8BJ37 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Tdp1Q8BJ37 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.99■□□□□ 0.95
Tdp1Q8BJ37 Gm2559-201ENSMUST00000201323 363 ntBASIC20.99■□□□□ 0.95
Tdp1Q8BJ37 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tdp1Q8BJ37 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Tdp1Q8BJ37 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.99■□□□□ 0.95
Tdp1Q8BJ37 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Tdp1Q8BJ37 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC20.98■□□□□ 0.95
Tdp1Q8BJ37 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tdp1Q8BJ37 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Tdp1Q8BJ37 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Tdp1Q8BJ37 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tdp1Q8BJ37 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tdp1Q8BJ37 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tdp1Q8BJ37 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tdp1Q8BJ37 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tdp1Q8BJ37 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.97■□□□□ 0.95
Tdp1Q8BJ37 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tdp1Q8BJ37 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tdp1Q8BJ37 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tdp1Q8BJ37 Gm5643-201ENSMUST00000117081 966 ntBASIC20.97■□□□□ 0.95
Tdp1Q8BJ37 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tdp1Q8BJ37 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tdp1Q8BJ37 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tdp1Q8BJ37 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tdp1Q8BJ37 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Tdp1Q8BJ37 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Tdp1Q8BJ37 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Tdp1Q8BJ37 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tdp1Q8BJ37 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tdp1Q8BJ37 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.96■□□□□ 0.95
Tdp1Q8BJ37 Dio3-201ENSMUST00000097228 1449 ntBASIC20.96■□□□□ 0.95
Tdp1Q8BJ37 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Tdp1Q8BJ37 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Tdp1Q8BJ37 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Tdp1Q8BJ37 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tdp1Q8BJ37 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tdp1Q8BJ37 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC20.96■□□□□ 0.95
Tdp1Q8BJ37 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.96■□□□□ 0.95
Tdp1Q8BJ37 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20.96■□□□□ 0.95
Tdp1Q8BJ37 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tdp1Q8BJ37 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tdp1Q8BJ37 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tdp1Q8BJ37 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tdp1Q8BJ37 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC20.95■□□□□ 0.94
Tdp1Q8BJ37 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tdp1Q8BJ37 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tdp1Q8BJ37 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tdp1Q8BJ37 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tdp1Q8BJ37 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tdp1Q8BJ37 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Tdp1Q8BJ37 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tdp1Q8BJ37 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Tdp1Q8BJ37 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tdp1Q8BJ37 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Tdp1Q8BJ37 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC20.94■□□□□ 0.94
Tdp1Q8BJ37 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tdp1Q8BJ37 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tdp1Q8BJ37 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tdp1Q8BJ37 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
Tdp1Q8BJ37 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tdp1Q8BJ37 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tdp1Q8BJ37 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Tdp1Q8BJ37 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Tdp1Q8BJ37 Mir7071-201ENSMUST00000184847 69 ntBASIC20.93■□□□□ 0.94
Tdp1Q8BJ37 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms