Protein–RNA interactions for Protein: Q8BFW4

Trim65, Tripartite motif-containing protein 65, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim65Q8BFW4 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim65Q8BFW4 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim65Q8BFW4 Golph3-205ENSMUST00000228671 2842 ntBASIC20.35■□□□□ 0.85
Trim65Q8BFW4 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.34■□□□□ 0.85
Trim65Q8BFW4 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Trim65Q8BFW4 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim65Q8BFW4 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Trim65Q8BFW4 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim65Q8BFW4 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Trim65Q8BFW4 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim65Q8BFW4 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.34■□□□□ 0.85
Trim65Q8BFW4 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Trim65Q8BFW4 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.34■□□□□ 0.85
Trim65Q8BFW4 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
Trim65Q8BFW4 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
Trim65Q8BFW4 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Trim65Q8BFW4 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trim65Q8BFW4 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trim65Q8BFW4 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Trim65Q8BFW4 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trim65Q8BFW4 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trim65Q8BFW4 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
Trim65Q8BFW4 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Trim65Q8BFW4 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Trim65Q8BFW4 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Trim65Q8BFW4 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Trim65Q8BFW4 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Trim65Q8BFW4 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim65Q8BFW4 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim65Q8BFW4 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim65Q8BFW4 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim65Q8BFW4 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Trim65Q8BFW4 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Trim65Q8BFW4 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Trim65Q8BFW4 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Trim65Q8BFW4 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Trim65Q8BFW4 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim65Q8BFW4 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Trim65Q8BFW4 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Trim65Q8BFW4 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim65Q8BFW4 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim65Q8BFW4 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim65Q8BFW4 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim65Q8BFW4 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim65Q8BFW4 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trim65Q8BFW4 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trim65Q8BFW4 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim65Q8BFW4 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim65Q8BFW4 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim65Q8BFW4 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim65Q8BFW4 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim65Q8BFW4 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim65Q8BFW4 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trim65Q8BFW4 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim65Q8BFW4 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim65Q8BFW4 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim65Q8BFW4 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim65Q8BFW4 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trim65Q8BFW4 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim65Q8BFW4 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim65Q8BFW4 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.29■□□□□ 0.84
Trim65Q8BFW4 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trim65Q8BFW4 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim65Q8BFW4 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim65Q8BFW4 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim65Q8BFW4 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim65Q8BFW4 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Trim65Q8BFW4 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim65Q8BFW4 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trim65Q8BFW4 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Trim65Q8BFW4 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim65Q8BFW4 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trim65Q8BFW4 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim65Q8BFW4 Gm38205-201ENSMUST00000192243 258 ntBASIC20.28■□□□□ 0.84
Trim65Q8BFW4 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim65Q8BFW4 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim65Q8BFW4 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim65Q8BFW4 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.28■□□□□ 0.84
Trim65Q8BFW4 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim65Q8BFW4 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.28■□□□□ 0.84
Trim65Q8BFW4 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim65Q8BFW4 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Trim65Q8BFW4 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim65Q8BFW4 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim65Q8BFW4 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Trim65Q8BFW4 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.27■□□□□ 0.84
Trim65Q8BFW4 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.27■□□□□ 0.84
Trim65Q8BFW4 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim65Q8BFW4 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Trim65Q8BFW4 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
Trim65Q8BFW4 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.27■□□□□ 0.83
Trim65Q8BFW4 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trim65Q8BFW4 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.26■□□□□ 0.83
Trim65Q8BFW4 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim65Q8BFW4 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Trim65Q8BFW4 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Trim65Q8BFW4 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trim65Q8BFW4 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trim65Q8BFW4 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim65Q8BFW4 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms