Protein–RNA interactions for Protein: Q80XU3

Nucks1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, mousemouse

Known RBP Predictions only

Length 234 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nucks1Q80XU3 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nucks1Q80XU3 Gm11421-201ENSMUST00000122124 294 ntBASIC20.27■□□□□ 0.84
Nucks1Q80XU3 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Nucks1Q80XU3 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nucks1Q80XU3 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
Nucks1Q80XU3 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.27■□□□□ 0.84
Nucks1Q80XU3 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Nucks1Q80XU3 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Nucks1Q80XU3 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nucks1Q80XU3 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Nucks1Q80XU3 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nucks1Q80XU3 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nucks1Q80XU3 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Nucks1Q80XU3 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Nucks1Q80XU3 Smad6-203ENSMUST00000179458 273 ntBASIC20.26■□□□□ 0.83
Nucks1Q80XU3 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.26■□□□□ 0.83
Nucks1Q80XU3 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Nucks1Q80XU3 BC021767-201ENSMUST00000126387 1716 ntBASIC20.26■□□□□ 0.83
Nucks1Q80XU3 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nucks1Q80XU3 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nucks1Q80XU3 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.25■□□□□ 0.83
Nucks1Q80XU3 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nucks1Q80XU3 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
Nucks1Q80XU3 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nucks1Q80XU3 Gm8493-201ENSMUST00000196881 489 ntBASIC20.25■□□□□ 0.83
Nucks1Q80XU3 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Nucks1Q80XU3 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nucks1Q80XU3 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.25■□□□□ 0.83
Nucks1Q80XU3 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nucks1Q80XU3 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Nucks1Q80XU3 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nucks1Q80XU3 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nucks1Q80XU3 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Nucks1Q80XU3 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nucks1Q80XU3 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nucks1Q80XU3 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC20.24■□□□□ 0.83
Nucks1Q80XU3 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nucks1Q80XU3 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nucks1Q80XU3 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nucks1Q80XU3 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Nucks1Q80XU3 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nucks1Q80XU3 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nucks1Q80XU3 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nucks1Q80XU3 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nucks1Q80XU3 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
Nucks1Q80XU3 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nucks1Q80XU3 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Nucks1Q80XU3 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nucks1Q80XU3 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.24■□□□□ 0.83
Nucks1Q80XU3 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nucks1Q80XU3 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nucks1Q80XU3 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.24■□□□□ 0.83
Nucks1Q80XU3 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nucks1Q80XU3 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nucks1Q80XU3 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC20.23■□□□□ 0.83
Nucks1Q80XU3 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nucks1Q80XU3 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nucks1Q80XU3 Gm12821-201ENSMUST00000120022 600 ntBASIC20.23■□□□□ 0.83
Nucks1Q80XU3 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Nucks1Q80XU3 Gm43173-201ENSMUST00000202246 593 ntBASIC20.23■□□□□ 0.83
Nucks1Q80XU3 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Nucks1Q80XU3 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Nucks1Q80XU3 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Nucks1Q80XU3 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nucks1Q80XU3 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.22■□□□□ 0.83
Nucks1Q80XU3 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nucks1Q80XU3 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nucks1Q80XU3 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nucks1Q80XU3 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nucks1Q80XU3 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Nucks1Q80XU3 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Nucks1Q80XU3 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nucks1Q80XU3 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nucks1Q80XU3 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nucks1Q80XU3 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Nucks1Q80XU3 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Nucks1Q80XU3 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
Nucks1Q80XU3 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nucks1Q80XU3 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.21■□□□□ 0.83
Nucks1Q80XU3 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.21■□□□□ 0.83
Nucks1Q80XU3 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nucks1Q80XU3 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Nucks1Q80XU3 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nucks1Q80XU3 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nucks1Q80XU3 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.21■□□□□ 0.83
Nucks1Q80XU3 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nucks1Q80XU3 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nucks1Q80XU3 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nucks1Q80XU3 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nucks1Q80XU3 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
Nucks1Q80XU3 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Nucks1Q80XU3 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nucks1Q80XU3 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nucks1Q80XU3 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Nucks1Q80XU3 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nucks1Q80XU3 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nucks1Q80XU3 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Nucks1Q80XU3 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nucks1Q80XU3 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC20.19■□□□□ 0.82
Nucks1Q80XU3 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms