Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rpp38Q80UU2 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rpp38Q80UU2 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rpp38Q80UU2 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rpp38Q80UU2 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rpp38Q80UU2 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.01■□□□□ 0.63
Rpp38Q80UU2 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rpp38Q80UU2 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rpp38Q80UU2 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Rpp38Q80UU2 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rpp38Q80UU2 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19■□□□□ 0.63
Rpp38Q80UU2 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rpp38Q80UU2 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Rpp38Q80UU2 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rpp38Q80UU2 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Rpp38Q80UU2 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rpp38Q80UU2 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
Rpp38Q80UU2 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Rpp38Q80UU2 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rpp38Q80UU2 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rpp38Q80UU2 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rpp38Q80UU2 Gm13234-201ENSMUST00000120010 747 ntBASIC18.99■□□□□ 0.63
Rpp38Q80UU2 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rpp38Q80UU2 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rpp38Q80UU2 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.99■□□□□ 0.63
Rpp38Q80UU2 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rpp38Q80UU2 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rpp38Q80UU2 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rpp38Q80UU2 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.99■□□□□ 0.63
Rpp38Q80UU2 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rpp38Q80UU2 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rpp38Q80UU2 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rpp38Q80UU2 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rpp38Q80UU2 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.99■□□□□ 0.63
Rpp38Q80UU2 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.98■□□□□ 0.63
Rpp38Q80UU2 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.98■□□□□ 0.63
Rpp38Q80UU2 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rpp38Q80UU2 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rpp38Q80UU2 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rpp38Q80UU2 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.97■□□□□ 0.63
Rpp38Q80UU2 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rpp38Q80UU2 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rpp38Q80UU2 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.97■□□□□ 0.63
Rpp38Q80UU2 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.97■□□□□ 0.63
Rpp38Q80UU2 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rpp38Q80UU2 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rpp38Q80UU2 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Rpp38Q80UU2 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Rpp38Q80UU2 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Rpp38Q80UU2 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.96■□□□□ 0.63
Rpp38Q80UU2 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Rpp38Q80UU2 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rpp38Q80UU2 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rpp38Q80UU2 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rpp38Q80UU2 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rpp38Q80UU2 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rpp38Q80UU2 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rpp38Q80UU2 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rpp38Q80UU2 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rpp38Q80UU2 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rpp38Q80UU2 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Rpp38Q80UU2 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rpp38Q80UU2 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rpp38Q80UU2 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rpp38Q80UU2 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rpp38Q80UU2 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rpp38Q80UU2 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rpp38Q80UU2 Gm13534-201ENSMUST00000121169 513 ntBASIC18.95■□□□□ 0.62
Rpp38Q80UU2 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rpp38Q80UU2 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rpp38Q80UU2 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
Rpp38Q80UU2 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.95■□□□□ 0.62
Rpp38Q80UU2 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.95■□□□□ 0.62
Rpp38Q80UU2 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.95■□□□□ 0.62
Rpp38Q80UU2 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.95■□□□□ 0.62
Rpp38Q80UU2 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
Rpp38Q80UU2 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rpp38Q80UU2 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rpp38Q80UU2 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rpp38Q80UU2 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rpp38Q80UU2 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rpp38Q80UU2 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rpp38Q80UU2 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rpp38Q80UU2 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rpp38Q80UU2 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Rpp38Q80UU2 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Rpp38Q80UU2 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Rpp38Q80UU2 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rpp38Q80UU2 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rpp38Q80UU2 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rpp38Q80UU2 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rpp38Q80UU2 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rpp38Q80UU2 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Rpp38Q80UU2 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rpp38Q80UU2 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.94■□□□□ 0.62
Rpp38Q80UU2 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.94■□□□□ 0.62
Rpp38Q80UU2 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rpp38Q80UU2 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rpp38Q80UU2 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rpp38Q80UU2 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms