Protein–RNA interactions for Protein: Q80TP3

Ubr5, E3 ubiquitin-protein ligase UBR5, mousemouse

Predictions only

Length 2,792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr5Q80TP3 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ubr5Q80TP3 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ubr5Q80TP3 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.68■□□□□ 0.26
Ubr5Q80TP3 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ubr5Q80TP3 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.68■□□□□ 0.26
Ubr5Q80TP3 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC16.67■□□□□ 0.26
Ubr5Q80TP3 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.67■□□□□ 0.26
Ubr5Q80TP3 Gm7889-201ENSMUST00000185591 958 ntBASIC16.67■□□□□ 0.26
Ubr5Q80TP3 Ank2-226ENSMUST00000189368 339 ntBASIC16.67■□□□□ 0.26
Ubr5Q80TP3 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.67■□□□□ 0.26
Ubr5Q80TP3 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Ubr5Q80TP3 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ubr5Q80TP3 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ubr5Q80TP3 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ubr5Q80TP3 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ubr5Q80TP3 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ubr5Q80TP3 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.66■□□□□ 0.26
Ubr5Q80TP3 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ubr5Q80TP3 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ubr5Q80TP3 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Ubr5Q80TP3 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.66■□□□□ 0.26
Ubr5Q80TP3 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ubr5Q80TP3 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.66■□□□□ 0.26
Ubr5Q80TP3 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ubr5Q80TP3 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ubr5Q80TP3 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ubr5Q80TP3 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ubr5Q80TP3 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ubr5Q80TP3 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.66■□□□□ 0.26
Ubr5Q80TP3 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ubr5Q80TP3 Gm30025-201ENSMUST00000218555 728 ntBASIC16.66■□□□□ 0.26
Ubr5Q80TP3 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC16.65■□□□□ 0.26
Ubr5Q80TP3 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ubr5Q80TP3 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
Ubr5Q80TP3 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ubr5Q80TP3 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ubr5Q80TP3 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ubr5Q80TP3 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ubr5Q80TP3 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ubr5Q80TP3 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ubr5Q80TP3 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ubr5Q80TP3 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ubr5Q80TP3 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ubr5Q80TP3 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ubr5Q80TP3 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Ubr5Q80TP3 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC16.64■□□□□ 0.25
Ubr5Q80TP3 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.64■□□□□ 0.25
Ubr5Q80TP3 Gm17971-201ENSMUST00000190239 806 ntBASIC16.64■□□□□ 0.25
Ubr5Q80TP3 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Ubr5Q80TP3 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC16.64■□□□□ 0.25
Ubr5Q80TP3 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ubr5Q80TP3 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ubr5Q80TP3 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ubr5Q80TP3 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ubr5Q80TP3 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ubr5Q80TP3 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.63■□□□□ 0.25
Ubr5Q80TP3 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ubr5Q80TP3 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ubr5Q80TP3 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ubr5Q80TP3 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ubr5Q80TP3 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ubr5Q80TP3 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ubr5Q80TP3 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ubr5Q80TP3 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ubr5Q80TP3 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Ubr5Q80TP3 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Ubr5Q80TP3 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ubr5Q80TP3 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ubr5Q80TP3 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ubr5Q80TP3 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ubr5Q80TP3 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ubr5Q80TP3 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Ubr5Q80TP3 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Ubr5Q80TP3 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Ubr5Q80TP3 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ubr5Q80TP3 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ubr5Q80TP3 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ubr5Q80TP3 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ubr5Q80TP3 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Ubr5Q80TP3 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ubr5Q80TP3 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ubr5Q80TP3 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ubr5Q80TP3 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ubr5Q80TP3 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.61■□□□□ 0.25
Ubr5Q80TP3 Gm11539-201ENSMUST00000119837 557 ntBASIC16.61■□□□□ 0.25
Ubr5Q80TP3 Gm13436-201ENSMUST00000120418 567 ntBASIC16.61■□□□□ 0.25
Ubr5Q80TP3 Odf3b-204ENSMUST00000227834 930 ntBASIC16.61■□□□□ 0.25
Ubr5Q80TP3 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Ubr5Q80TP3 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ubr5Q80TP3 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ubr5Q80TP3 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Ubr5Q80TP3 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Ubr5Q80TP3 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ubr5Q80TP3 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ubr5Q80TP3 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ubr5Q80TP3 Gm10013-201ENSMUST00000106074 672 ntBASIC16.6■□□□□ 0.25
Ubr5Q80TP3 Gm18101-201ENSMUST00000215769 548 ntBASIC16.6■□□□□ 0.25
Ubr5Q80TP3 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ubr5Q80TP3 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ubr5Q80TP3 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms