Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.63■□□□□ 0.57
Pcdh19Q80TF3 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh19Q80TF3 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
Pcdh19Q80TF3 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.63■□□□□ 0.57
Pcdh19Q80TF3 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh19Q80TF3 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh19Q80TF3 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.62■□□□□ 0.57
Pcdh19Q80TF3 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh19Q80TF3 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh19Q80TF3 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh19Q80TF3 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh19Q80TF3 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh19Q80TF3 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh19Q80TF3 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh19Q80TF3 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh19Q80TF3 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh19Q80TF3 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.62■□□□□ 0.57
Pcdh19Q80TF3 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.61■□□□□ 0.57
Pcdh19Q80TF3 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Pcdh19Q80TF3 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh19Q80TF3 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh19Q80TF3 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh19Q80TF3 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.61■□□□□ 0.57
Pcdh19Q80TF3 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh19Q80TF3 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Pcdh19Q80TF3 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh19Q80TF3 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh19Q80TF3 Gm6365-201ENSMUST00000054711 744 ntBASIC18.61■□□□□ 0.57
Pcdh19Q80TF3 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Pcdh19Q80TF3 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh19Q80TF3 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh19Q80TF3 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh19Q80TF3 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.6■□□□□ 0.57
Pcdh19Q80TF3 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Pcdh19Q80TF3 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh19Q80TF3 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Pcdh19Q80TF3 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
Pcdh19Q80TF3 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh19Q80TF3 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.6■□□□□ 0.57
Pcdh19Q80TF3 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh19Q80TF3 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh19Q80TF3 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh19Q80TF3 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Pcdh19Q80TF3 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh19Q80TF3 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh19Q80TF3 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh19Q80TF3 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh19Q80TF3 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh19Q80TF3 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh19Q80TF3 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh19Q80TF3 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh19Q80TF3 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Pcdh19Q80TF3 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh19Q80TF3 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh19Q80TF3 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh19Q80TF3 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.59■□□□□ 0.57
Pcdh19Q80TF3 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh19Q80TF3 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Pcdh19Q80TF3 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh19Q80TF3 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh19Q80TF3 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh19Q80TF3 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh19Q80TF3 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Pcdh19Q80TF3 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh19Q80TF3 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdh19Q80TF3 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdh19Q80TF3 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.58■□□□□ 0.57
Pcdh19Q80TF3 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
Pcdh19Q80TF3 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdh19Q80TF3 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdh19Q80TF3 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.58■□□□□ 0.56
Pcdh19Q80TF3 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.58■□□□□ 0.56
Pcdh19Q80TF3 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdh19Q80TF3 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Pcdh19Q80TF3 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdh19Q80TF3 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdh19Q80TF3 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Pcdh19Q80TF3 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdh19Q80TF3 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.57■□□□□ 0.56
Pcdh19Q80TF3 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.57■□□□□ 0.56
Pcdh19Q80TF3 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Pcdh19Q80TF3 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Pcdh19Q80TF3 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
Pcdh19Q80TF3 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh19Q80TF3 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Pcdh19Q80TF3 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh19Q80TF3 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh19Q80TF3 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh19Q80TF3 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh19Q80TF3 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh19Q80TF3 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh19Q80TF3 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh19Q80TF3 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh19Q80TF3 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdh19Q80TF3 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Pcdh19Q80TF3 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh19Q80TF3 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh19Q80TF3 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh19Q80TF3 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.55■□□□□ 0.56
Pcdh19Q80TF3 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms