Protein–RNA interactions for Protein: Q6PDY0

Ccdc85b, Coiled-coil domain-containing protein 85B, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85bQ6PDY0 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc85bQ6PDY0 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc85bQ6PDY0 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc85bQ6PDY0 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc85bQ6PDY0 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc85bQ6PDY0 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc85bQ6PDY0 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc85bQ6PDY0 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
Ccdc85bQ6PDY0 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc85bQ6PDY0 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc85bQ6PDY0 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc85bQ6PDY0 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Ccdc85bQ6PDY0 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc85bQ6PDY0 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc85bQ6PDY0 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.74■□□□□ 0.75
Ccdc85bQ6PDY0 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc85bQ6PDY0 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
Ccdc85bQ6PDY0 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc85bQ6PDY0 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc85bQ6PDY0 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc85bQ6PDY0 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC19.74■□□□□ 0.75
Ccdc85bQ6PDY0 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.74■□□□□ 0.75
Ccdc85bQ6PDY0 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
Ccdc85bQ6PDY0 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Ccdc85bQ6PDY0 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc85bQ6PDY0 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
Ccdc85bQ6PDY0 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc85bQ6PDY0 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc85bQ6PDY0 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc85bQ6PDY0 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc85bQ6PDY0 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc85bQ6PDY0 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc85bQ6PDY0 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.73■□□□□ 0.75
Ccdc85bQ6PDY0 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc85bQ6PDY0 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
Ccdc85bQ6PDY0 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Ccdc85bQ6PDY0 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC19.73■□□□□ 0.75
Ccdc85bQ6PDY0 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc85bQ6PDY0 Gm5417-201ENSMUST00000079706 384 ntBASIC19.73■□□□□ 0.75
Ccdc85bQ6PDY0 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc85bQ6PDY0 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.73■□□□□ 0.75
Ccdc85bQ6PDY0 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Ccdc85bQ6PDY0 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Ccdc85bQ6PDY0 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc85bQ6PDY0 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc85bQ6PDY0 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Ccdc85bQ6PDY0 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Ccdc85bQ6PDY0 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Ccdc85bQ6PDY0 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc85bQ6PDY0 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Ccdc85bQ6PDY0 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC19.72■□□□□ 0.75
Ccdc85bQ6PDY0 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
Ccdc85bQ6PDY0 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc85bQ6PDY0 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc85bQ6PDY0 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.72■□□□□ 0.75
Ccdc85bQ6PDY0 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc85bQ6PDY0 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc85bQ6PDY0 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.71■□□□□ 0.75
Ccdc85bQ6PDY0 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc85bQ6PDY0 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc85bQ6PDY0 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc85bQ6PDY0 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc85bQ6PDY0 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc85bQ6PDY0 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc85bQ6PDY0 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc85bQ6PDY0 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc85bQ6PDY0 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.71■□□□□ 0.75
Ccdc85bQ6PDY0 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc85bQ6PDY0 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
Ccdc85bQ6PDY0 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc85bQ6PDY0 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc85bQ6PDY0 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc85bQ6PDY0 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc85bQ6PDY0 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc85bQ6PDY0 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc85bQ6PDY0 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc85bQ6PDY0 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc85bQ6PDY0 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc85bQ6PDY0 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
Ccdc85bQ6PDY0 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc85bQ6PDY0 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc85bQ6PDY0 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.69■□□□□ 0.74
Ccdc85bQ6PDY0 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc85bQ6PDY0 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc85bQ6PDY0 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc85bQ6PDY0 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc85bQ6PDY0 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc85bQ6PDY0 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc85bQ6PDY0 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc85bQ6PDY0 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Ccdc85bQ6PDY0 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc85bQ6PDY0 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc85bQ6PDY0 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc85bQ6PDY0 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.68■□□□□ 0.74
Ccdc85bQ6PDY0 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc85bQ6PDY0 Gm2399-201ENSMUST00000104944 225 ntBASIC19.68■□□□□ 0.74
Ccdc85bQ6PDY0 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Ccdc85bQ6PDY0 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.67■□□□□ 0.74
Ccdc85bQ6PDY0 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc85bQ6PDY0 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms