Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Rnf220Q6PDX6 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf220Q6PDX6 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf220Q6PDX6 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf220Q6PDX6 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Rnf220Q6PDX6 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.91■□□□□ 0.46
Rnf220Q6PDX6 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf220Q6PDX6 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf220Q6PDX6 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf220Q6PDX6 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.91■□□□□ 0.46
Rnf220Q6PDX6 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf220Q6PDX6 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf220Q6PDX6 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf220Q6PDX6 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf220Q6PDX6 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf220Q6PDX6 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf220Q6PDX6 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rnf220Q6PDX6 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Rnf220Q6PDX6 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rnf220Q6PDX6 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rnf220Q6PDX6 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rnf220Q6PDX6 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Rnf220Q6PDX6 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rnf220Q6PDX6 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.9■□□□□ 0.46
Rnf220Q6PDX6 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rnf220Q6PDX6 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.9■□□□□ 0.46
Rnf220Q6PDX6 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Rnf220Q6PDX6 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.9■□□□□ 0.46
Rnf220Q6PDX6 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rnf220Q6PDX6 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.9■□□□□ 0.46
Rnf220Q6PDX6 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.9■□□□□ 0.46
Rnf220Q6PDX6 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Rnf220Q6PDX6 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC17.9■□□□□ 0.46
Rnf220Q6PDX6 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
Rnf220Q6PDX6 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.9■□□□□ 0.46
Rnf220Q6PDX6 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rnf220Q6PDX6 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rnf220Q6PDX6 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rnf220Q6PDX6 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Rnf220Q6PDX6 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rnf220Q6PDX6 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC17.89■□□□□ 0.45
Rnf220Q6PDX6 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rnf220Q6PDX6 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Rnf220Q6PDX6 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.89■□□□□ 0.45
Rnf220Q6PDX6 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf220Q6PDX6 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Rnf220Q6PDX6 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Rnf220Q6PDX6 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf220Q6PDX6 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf220Q6PDX6 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf220Q6PDX6 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf220Q6PDX6 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf220Q6PDX6 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf220Q6PDX6 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf220Q6PDX6 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rnf220Q6PDX6 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.88■□□□□ 0.45
Rnf220Q6PDX6 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf220Q6PDX6 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf220Q6PDX6 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf220Q6PDX6 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.87■□□□□ 0.45
Rnf220Q6PDX6 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf220Q6PDX6 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf220Q6PDX6 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf220Q6PDX6 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf220Q6PDX6 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC17.87■□□□□ 0.45
Rnf220Q6PDX6 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Rnf220Q6PDX6 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf220Q6PDX6 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.87■□□□□ 0.45
Rnf220Q6PDX6 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf220Q6PDX6 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.87■□□□□ 0.45
Rnf220Q6PDX6 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf220Q6PDX6 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf220Q6PDX6 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rnf220Q6PDX6 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf220Q6PDX6 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf220Q6PDX6 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC17.86■□□□□ 0.45
Rnf220Q6PDX6 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.86■□□□□ 0.45
Rnf220Q6PDX6 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf220Q6PDX6 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf220Q6PDX6 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf220Q6PDX6 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf220Q6PDX6 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf220Q6PDX6 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf220Q6PDX6 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf220Q6PDX6 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf220Q6PDX6 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf220Q6PDX6 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Rnf220Q6PDX6 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rnf220Q6PDX6 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf220Q6PDX6 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf220Q6PDX6 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC17.85■□□□□ 0.45
Rnf220Q6PDX6 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf220Q6PDX6 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.85■□□□□ 0.45
Rnf220Q6PDX6 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.85■□□□□ 0.45
Rnf220Q6PDX6 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf220Q6PDX6 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Rnf220Q6PDX6 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf220Q6PDX6 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf220Q6PDX6 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf220Q6PDX6 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 183.8 ms