Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Casc4Q6P2L7 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.14■□□□□ 0.66
Casc4Q6P2L7 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
Casc4Q6P2L7 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Casc4Q6P2L7 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Casc4Q6P2L7 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Casc4Q6P2L7 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Casc4Q6P2L7 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.14■□□□□ 0.65
Casc4Q6P2L7 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Casc4Q6P2L7 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Casc4Q6P2L7 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Casc4Q6P2L7 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Casc4Q6P2L7 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Casc4Q6P2L7 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Casc4Q6P2L7 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.13■□□□□ 0.65
Casc4Q6P2L7 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.13■□□□□ 0.65
Casc4Q6P2L7 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Casc4Q6P2L7 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Casc4Q6P2L7 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Casc4Q6P2L7 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Casc4Q6P2L7 Reep4-203ENSMUST00000226563 1444 ntBASIC19.13■□□□□ 0.65
Casc4Q6P2L7 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Casc4Q6P2L7 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.13■□□□□ 0.65
Casc4Q6P2L7 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Casc4Q6P2L7 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Casc4Q6P2L7 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Casc4Q6P2L7 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.13■□□□□ 0.65
Casc4Q6P2L7 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Casc4Q6P2L7 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Casc4Q6P2L7 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Casc4Q6P2L7 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Casc4Q6P2L7 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Casc4Q6P2L7 Gm42778-201ENSMUST00000199644 553 ntBASIC19.12■□□□□ 0.65
Casc4Q6P2L7 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.12■□□□□ 0.65
Casc4Q6P2L7 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Casc4Q6P2L7 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Casc4Q6P2L7 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
Casc4Q6P2L7 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Casc4Q6P2L7 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Casc4Q6P2L7 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Casc4Q6P2L7 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Casc4Q6P2L7 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Casc4Q6P2L7 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Casc4Q6P2L7 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Casc4Q6P2L7 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
Casc4Q6P2L7 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Casc4Q6P2L7 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Casc4Q6P2L7 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Casc4Q6P2L7 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Casc4Q6P2L7 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.11■□□□□ 0.65
Casc4Q6P2L7 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.11■□□□□ 0.65
Casc4Q6P2L7 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.11■□□□□ 0.65
Casc4Q6P2L7 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.11■□□□□ 0.65
Casc4Q6P2L7 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Casc4Q6P2L7 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Casc4Q6P2L7 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.11■□□□□ 0.65
Casc4Q6P2L7 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Casc4Q6P2L7 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.11■□□□□ 0.65
Casc4Q6P2L7 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.11■□□□□ 0.65
Casc4Q6P2L7 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Casc4Q6P2L7 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
Casc4Q6P2L7 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Casc4Q6P2L7 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Casc4Q6P2L7 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Casc4Q6P2L7 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Casc4Q6P2L7 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Casc4Q6P2L7 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Casc4Q6P2L7 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.1■□□□□ 0.65
Casc4Q6P2L7 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.1■□□□□ 0.65
Casc4Q6P2L7 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Casc4Q6P2L7 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Casc4Q6P2L7 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Casc4Q6P2L7 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Casc4Q6P2L7 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Casc4Q6P2L7 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Casc4Q6P2L7 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Casc4Q6P2L7 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Casc4Q6P2L7 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Casc4Q6P2L7 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.09■□□□□ 0.65
Casc4Q6P2L7 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Casc4Q6P2L7 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Casc4Q6P2L7 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Casc4Q6P2L7 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Casc4Q6P2L7 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Casc4Q6P2L7 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Casc4Q6P2L7 Gm38205-201ENSMUST00000192243 258 ntBASIC19.09■□□□□ 0.65
Casc4Q6P2L7 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Casc4Q6P2L7 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Casc4Q6P2L7 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Casc4Q6P2L7 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Casc4Q6P2L7 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Casc4Q6P2L7 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Casc4Q6P2L7 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Casc4Q6P2L7 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.08■□□□□ 0.64
Casc4Q6P2L7 Gm42642-201ENSMUST00000200683 355 ntBASIC19.08■□□□□ 0.64
Casc4Q6P2L7 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.08■□□□□ 0.64
Casc4Q6P2L7 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Casc4Q6P2L7 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Casc4Q6P2L7 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.08■□□□□ 0.64
Casc4Q6P2L7 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms