Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Hdac4Q6NZM9 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC21.28■■□□□ 1
Hdac4Q6NZM9 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Hdac4Q6NZM9 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Hdac4Q6NZM9 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Hdac4Q6NZM9 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC21.28■■□□□ 1
Hdac4Q6NZM9 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Hdac4Q6NZM9 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC21.27■■□□□ 1
Hdac4Q6NZM9 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC21.27■■□□□ 1
Hdac4Q6NZM9 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Hdac4Q6NZM9 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC21.27■■□□□ 1
Hdac4Q6NZM9 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Hdac4Q6NZM9 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Hdac4Q6NZM9 Rncr4-201ENSMUST00000194541 2234 ntBASIC21.27■■□□□ 1
Hdac4Q6NZM9 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC21.27■■□□□ 1
Hdac4Q6NZM9 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Hdac4Q6NZM9 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC21.27■■□□□ 1
Hdac4Q6NZM9 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Hdac4Q6NZM9 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Hdac4Q6NZM9 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
Hdac4Q6NZM9 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Hdac4Q6NZM9 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Hdac4Q6NZM9 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
Hdac4Q6NZM9 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Hdac4Q6NZM9 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hdac4Q6NZM9 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hdac4Q6NZM9 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hdac4Q6NZM9 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hdac4Q6NZM9 Gm38205-201ENSMUST00000192243 258 ntBASIC21.26■□□□□ 0.99
Hdac4Q6NZM9 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hdac4Q6NZM9 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hdac4Q6NZM9 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hdac4Q6NZM9 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC21.26■□□□□ 0.99
Hdac4Q6NZM9 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Hdac4Q6NZM9 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hdac4Q6NZM9 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hdac4Q6NZM9 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Hdac4Q6NZM9 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC21.26■□□□□ 0.99
Hdac4Q6NZM9 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hdac4Q6NZM9 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Hdac4Q6NZM9 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Hdac4Q6NZM9 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Hdac4Q6NZM9 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Hdac4Q6NZM9 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Hdac4Q6NZM9 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Hdac4Q6NZM9 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Hdac4Q6NZM9 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Hdac4Q6NZM9 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Hdac4Q6NZM9 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC21.25■□□□□ 0.99
Hdac4Q6NZM9 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC21.25■□□□□ 0.99
Hdac4Q6NZM9 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Hdac4Q6NZM9 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Hdac4Q6NZM9 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Hdac4Q6NZM9 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Hdac4Q6NZM9 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Hdac4Q6NZM9 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Hdac4Q6NZM9 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Hdac4Q6NZM9 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hdac4Q6NZM9 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
Hdac4Q6NZM9 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hdac4Q6NZM9 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC21.24■□□□□ 0.99
Hdac4Q6NZM9 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Hdac4Q6NZM9 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hdac4Q6NZM9 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Hdac4Q6NZM9 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hdac4Q6NZM9 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hdac4Q6NZM9 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hdac4Q6NZM9 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Hdac4Q6NZM9 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
Hdac4Q6NZM9 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Hdac4Q6NZM9 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hdac4Q6NZM9 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hdac4Q6NZM9 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hdac4Q6NZM9 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hdac4Q6NZM9 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hdac4Q6NZM9 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
Hdac4Q6NZM9 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Hdac4Q6NZM9 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hdac4Q6NZM9 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hdac4Q6NZM9 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC21.22■□□□□ 0.99
Hdac4Q6NZM9 Gm27032-201ENSMUST00000183124 1116 ntBASIC21.22■□□□□ 0.99
Hdac4Q6NZM9 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hdac4Q6NZM9 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hdac4Q6NZM9 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Hdac4Q6NZM9 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC21.22■□□□□ 0.99
Hdac4Q6NZM9 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hdac4Q6NZM9 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hdac4Q6NZM9 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Hdac4Q6NZM9 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hdac4Q6NZM9 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hdac4Q6NZM9 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hdac4Q6NZM9 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC21.21■□□□□ 0.99
Hdac4Q6NZM9 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Hdac4Q6NZM9 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Hdac4Q6NZM9 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC21.21■□□□□ 0.99
Hdac4Q6NZM9 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
Hdac4Q6NZM9 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hdac4Q6NZM9 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hdac4Q6NZM9 Gm9885-202ENSMUST00000186234 2209 ntBASIC21.21■□□□□ 0.99
Hdac4Q6NZM9 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms