Protein–RNA interactions for Protein: Q6NZL8

Scube1, Signal peptide, CUB and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube1Q6NZL8 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Scube1Q6NZL8 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scube1Q6NZL8 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scube1Q6NZL8 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scube1Q6NZL8 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scube1Q6NZL8 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scube1Q6NZL8 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Scube1Q6NZL8 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scube1Q6NZL8 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scube1Q6NZL8 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Scube1Q6NZL8 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Scube1Q6NZL8 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Scube1Q6NZL8 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Scube1Q6NZL8 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Scube1Q6NZL8 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
Scube1Q6NZL8 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Scube1Q6NZL8 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.2■□□□□ 0.5
Scube1Q6NZL8 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scube1Q6NZL8 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
Scube1Q6NZL8 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scube1Q6NZL8 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.19■□□□□ 0.5
Scube1Q6NZL8 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
Scube1Q6NZL8 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scube1Q6NZL8 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scube1Q6NZL8 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Scube1Q6NZL8 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Scube1Q6NZL8 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.19■□□□□ 0.5
Scube1Q6NZL8 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Scube1Q6NZL8 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.19■□□□□ 0.5
Scube1Q6NZL8 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.19■□□□□ 0.5
Scube1Q6NZL8 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scube1Q6NZL8 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scube1Q6NZL8 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scube1Q6NZL8 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scube1Q6NZL8 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.19■□□□□ 0.5
Scube1Q6NZL8 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Scube1Q6NZL8 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scube1Q6NZL8 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scube1Q6NZL8 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Scube1Q6NZL8 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scube1Q6NZL8 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scube1Q6NZL8 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scube1Q6NZL8 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Scube1Q6NZL8 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Scube1Q6NZL8 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.18■□□□□ 0.5
Scube1Q6NZL8 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.18■□□□□ 0.5
Scube1Q6NZL8 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.18■□□□□ 0.5
Scube1Q6NZL8 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scube1Q6NZL8 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scube1Q6NZL8 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.18■□□□□ 0.5
Scube1Q6NZL8 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scube1Q6NZL8 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scube1Q6NZL8 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scube1Q6NZL8 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scube1Q6NZL8 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scube1Q6NZL8 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scube1Q6NZL8 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Scube1Q6NZL8 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Scube1Q6NZL8 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scube1Q6NZL8 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scube1Q6NZL8 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scube1Q6NZL8 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scube1Q6NZL8 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scube1Q6NZL8 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scube1Q6NZL8 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scube1Q6NZL8 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scube1Q6NZL8 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scube1Q6NZL8 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.16■□□□□ 0.5
Scube1Q6NZL8 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scube1Q6NZL8 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scube1Q6NZL8 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scube1Q6NZL8 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scube1Q6NZL8 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Scube1Q6NZL8 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Scube1Q6NZL8 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.15■□□□□ 0.5
Scube1Q6NZL8 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.15■□□□□ 0.5
Scube1Q6NZL8 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scube1Q6NZL8 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scube1Q6NZL8 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scube1Q6NZL8 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Scube1Q6NZL8 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.15■□□□□ 0.5
Scube1Q6NZL8 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Scube1Q6NZL8 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scube1Q6NZL8 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.15■□□□□ 0.5
Scube1Q6NZL8 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.15■□□□□ 0.5
Scube1Q6NZL8 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scube1Q6NZL8 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Scube1Q6NZL8 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scube1Q6NZL8 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Scube1Q6NZL8 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Scube1Q6NZL8 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Scube1Q6NZL8 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Scube1Q6NZL8 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Scube1Q6NZL8 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Scube1Q6NZL8 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
Scube1Q6NZL8 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.14■□□□□ 0.49
Scube1Q6NZL8 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Scube1Q6NZL8 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scube1Q6NZL8 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scube1Q6NZL8 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms