Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Sp140Q6NSQ5 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sp140Q6NSQ5 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sp140Q6NSQ5 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sp140Q6NSQ5 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sp140Q6NSQ5 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sp140Q6NSQ5 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Sp140Q6NSQ5 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sp140Q6NSQ5 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sp140Q6NSQ5 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sp140Q6NSQ5 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sp140Q6NSQ5 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sp140Q6NSQ5 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sp140Q6NSQ5 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sp140Q6NSQ5 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sp140Q6NSQ5 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sp140Q6NSQ5 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sp140Q6NSQ5 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sp140Q6NSQ5 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Sp140Q6NSQ5 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sp140Q6NSQ5 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sp140Q6NSQ5 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sp140Q6NSQ5 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sp140Q6NSQ5 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.24■□□□□ 0.67
Sp140Q6NSQ5 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Sp140Q6NSQ5 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sp140Q6NSQ5 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.24■□□□□ 0.67
Sp140Q6NSQ5 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sp140Q6NSQ5 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Sp140Q6NSQ5 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sp140Q6NSQ5 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Sp140Q6NSQ5 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.23■□□□□ 0.67
Sp140Q6NSQ5 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
Sp140Q6NSQ5 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
Sp140Q6NSQ5 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Sp140Q6NSQ5 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sp140Q6NSQ5 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Sp140Q6NSQ5 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sp140Q6NSQ5 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Sp140Q6NSQ5 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sp140Q6NSQ5 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sp140Q6NSQ5 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sp140Q6NSQ5 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sp140Q6NSQ5 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.22■□□□□ 0.67
Sp140Q6NSQ5 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sp140Q6NSQ5 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sp140Q6NSQ5 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Sp140Q6NSQ5 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Sp140Q6NSQ5 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sp140Q6NSQ5 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.22■□□□□ 0.67
Sp140Q6NSQ5 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Sp140Q6NSQ5 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Sp140Q6NSQ5 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sp140Q6NSQ5 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sp140Q6NSQ5 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sp140Q6NSQ5 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sp140Q6NSQ5 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sp140Q6NSQ5 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Sp140Q6NSQ5 Gm7860-201ENSMUST00000121190 879 ntBASIC19.21■□□□□ 0.67
Sp140Q6NSQ5 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sp140Q6NSQ5 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sp140Q6NSQ5 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sp140Q6NSQ5 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sp140Q6NSQ5 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.21■□□□□ 0.67
Sp140Q6NSQ5 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Sp140Q6NSQ5 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sp140Q6NSQ5 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sp140Q6NSQ5 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sp140Q6NSQ5 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Sp140Q6NSQ5 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
Sp140Q6NSQ5 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Sp140Q6NSQ5 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sp140Q6NSQ5 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sp140Q6NSQ5 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.2■□□□□ 0.66
Sp140Q6NSQ5 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sp140Q6NSQ5 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Sp140Q6NSQ5 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Sp140Q6NSQ5 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
Sp140Q6NSQ5 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sp140Q6NSQ5 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sp140Q6NSQ5 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sp140Q6NSQ5 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Sp140Q6NSQ5 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sp140Q6NSQ5 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sp140Q6NSQ5 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Sp140Q6NSQ5 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Sp140Q6NSQ5 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Sp140Q6NSQ5 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.19■□□□□ 0.66
Sp140Q6NSQ5 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.19■□□□□ 0.66
Sp140Q6NSQ5 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Sp140Q6NSQ5 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.19■□□□□ 0.66
Sp140Q6NSQ5 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sp140Q6NSQ5 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sp140Q6NSQ5 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sp140Q6NSQ5 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sp140Q6NSQ5 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sp140Q6NSQ5 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sp140Q6NSQ5 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sp140Q6NSQ5 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sp140Q6NSQ5 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms