Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
AtmQ62388 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
AtmQ62388 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
AtmQ62388 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
AtmQ62388 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
AtmQ62388 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
AtmQ62388 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
AtmQ62388 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
AtmQ62388 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
AtmQ62388 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.17■□□□□ 0.5
AtmQ62388 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
AtmQ62388 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
AtmQ62388 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
AtmQ62388 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.17■□□□□ 0.5
AtmQ62388 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
AtmQ62388 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
AtmQ62388 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC18.17■□□□□ 0.5
AtmQ62388 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
AtmQ62388 Gm5417-201ENSMUST00000079706 384 ntBASIC18.17■□□□□ 0.5
AtmQ62388 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.17■□□□□ 0.5
AtmQ62388 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
AtmQ62388 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.16■□□□□ 0.5
AtmQ62388 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.16■□□□□ 0.5
AtmQ62388 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
AtmQ62388 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.16■□□□□ 0.5
AtmQ62388 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
AtmQ62388 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
AtmQ62388 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
AtmQ62388 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
AtmQ62388 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.16■□□□□ 0.5
AtmQ62388 Gm2399-201ENSMUST00000104944 225 ntBASIC18.16■□□□□ 0.5
AtmQ62388 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
AtmQ62388 Gm25925-201ENSMUST00000158314 306 ntBASIC18.16■□□□□ 0.5
AtmQ62388 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
AtmQ62388 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
AtmQ62388 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
AtmQ62388 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
AtmQ62388 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.15■□□□□ 0.5
AtmQ62388 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
AtmQ62388 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
AtmQ62388 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
AtmQ62388 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
AtmQ62388 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
AtmQ62388 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.15■□□□□ 0.5
AtmQ62388 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
AtmQ62388 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
AtmQ62388 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
AtmQ62388 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
AtmQ62388 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.15■□□□□ 0.5
AtmQ62388 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
AtmQ62388 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
AtmQ62388 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
AtmQ62388 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
AtmQ62388 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
AtmQ62388 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
AtmQ62388 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
AtmQ62388 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
AtmQ62388 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
AtmQ62388 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
AtmQ62388 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.14■□□□□ 0.49
AtmQ62388 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
AtmQ62388 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
AtmQ62388 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
AtmQ62388 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.14■□□□□ 0.49
AtmQ62388 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
AtmQ62388 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
AtmQ62388 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
AtmQ62388 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.13■□□□□ 0.49
AtmQ62388 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.13■□□□□ 0.49
AtmQ62388 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
AtmQ62388 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
AtmQ62388 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
AtmQ62388 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.13■□□□□ 0.49
AtmQ62388 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.13■□□□□ 0.49
AtmQ62388 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
AtmQ62388 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
AtmQ62388 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
AtmQ62388 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
AtmQ62388 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
AtmQ62388 Ank2-226ENSMUST00000189368 339 ntBASIC18.13■□□□□ 0.49
AtmQ62388 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
AtmQ62388 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
AtmQ62388 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
AtmQ62388 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.12■□□□□ 0.49
AtmQ62388 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
AtmQ62388 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.12■□□□□ 0.49
AtmQ62388 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.12■□□□□ 0.49
AtmQ62388 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
AtmQ62388 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
AtmQ62388 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.11■□□□□ 0.49
AtmQ62388 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
AtmQ62388 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
AtmQ62388 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
AtmQ62388 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
AtmQ62388 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
AtmQ62388 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.11■□□□□ 0.49
AtmQ62388 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
AtmQ62388 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.1■□□□□ 0.49
AtmQ62388 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
AtmQ62388 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms