Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Six2Q62232 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Six2Q62232 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Six2Q62232 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Six2Q62232 Gm43060-201ENSMUST00000200621 289 ntBASIC20.31■□□□□ 0.84
Six2Q62232 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Six2Q62232 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Six2Q62232 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Six2Q62232 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Six2Q62232 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Six2Q62232 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Six2Q62232 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Six2Q62232 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Six2Q62232 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Six2Q62232 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.3■□□□□ 0.84
Six2Q62232 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Six2Q62232 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Six2Q62232 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Six2Q62232 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Six2Q62232 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.29■□□□□ 0.84
Six2Q62232 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Six2Q62232 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.29■□□□□ 0.84
Six2Q62232 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.29■□□□□ 0.84
Six2Q62232 Gm38205-201ENSMUST00000192243 258 ntBASIC20.29■□□□□ 0.84
Six2Q62232 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.29■□□□□ 0.84
Six2Q62232 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Six2Q62232 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Six2Q62232 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.29■□□□□ 0.84
Six2Q62232 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Six2Q62232 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.29■□□□□ 0.84
Six2Q62232 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Six2Q62232 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.28■□□□□ 0.84
Six2Q62232 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Six2Q62232 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Six2Q62232 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Six2Q62232 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Six2Q62232 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Six2Q62232 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Six2Q62232 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Six2Q62232 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Six2Q62232 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Six2Q62232 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Six2Q62232 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Six2Q62232 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Six2Q62232 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Six2Q62232 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Six2Q62232 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Six2Q62232 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Six2Q62232 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Six2Q62232 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Six2Q62232 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Six2Q62232 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.27■□□□□ 0.84
Six2Q62232 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Six2Q62232 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Six2Q62232 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.27■□□□□ 0.84
Six2Q62232 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Six2Q62232 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.27■□□□□ 0.84
Six2Q62232 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.27■□□□□ 0.84
Six2Q62232 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Six2Q62232 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.27■□□□□ 0.84
Six2Q62232 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.27■□□□□ 0.84
Six2Q62232 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Six2Q62232 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Six2Q62232 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Six2Q62232 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Six2Q62232 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Six2Q62232 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Six2Q62232 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Six2Q62232 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Six2Q62232 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Six2Q62232 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Six2Q62232 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Six2Q62232 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Six2Q62232 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Six2Q62232 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Six2Q62232 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Six2Q62232 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.26■□□□□ 0.83
Six2Q62232 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.25■□□□□ 0.83
Six2Q62232 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Six2Q62232 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Six2Q62232 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Six2Q62232 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.25■□□□□ 0.83
Six2Q62232 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
Six2Q62232 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Six2Q62232 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.25■□□□□ 0.83
Six2Q62232 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Six2Q62232 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Six2Q62232 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Six2Q62232 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Six2Q62232 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.24■□□□□ 0.83
Six2Q62232 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Six2Q62232 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Six2Q62232 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Six2Q62232 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Six2Q62232 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
Six2Q62232 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.24■□□□□ 0.83
Six2Q62232 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Six2Q62232 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Six2Q62232 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Six2Q62232 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms