Protein–RNA interactions for Protein: Q62225

Cish, Cytokine-inducible SH2-containing protein, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CishQ62225 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CishQ62225 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.09■□□□□ 0.49
CishQ62225 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CishQ62225 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CishQ62225 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CishQ62225 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
CishQ62225 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.09■□□□□ 0.49
CishQ62225 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.09■□□□□ 0.49
CishQ62225 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CishQ62225 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CishQ62225 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CishQ62225 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CishQ62225 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
CishQ62225 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CishQ62225 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.08■□□□□ 0.48
CishQ62225 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CishQ62225 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CishQ62225 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.07■□□□□ 0.48
CishQ62225 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.07■□□□□ 0.48
CishQ62225 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CishQ62225 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CishQ62225 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CishQ62225 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CishQ62225 Gm27405-201ENSMUST00000184201 112 ntBASIC18.07■□□□□ 0.48
CishQ62225 Gm7514-201ENSMUST00000209475 934 ntBASIC18.07■□□□□ 0.48
CishQ62225 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CishQ62225 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CishQ62225 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CishQ62225 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CishQ62225 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CishQ62225 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CishQ62225 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.06■□□□□ 0.48
CishQ62225 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.06■□□□□ 0.48
CishQ62225 Gm13534-201ENSMUST00000121169 513 ntBASIC18.06■□□□□ 0.48
CishQ62225 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.06■□□□□ 0.48
CishQ62225 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.06■□□□□ 0.48
CishQ62225 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CishQ62225 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CishQ62225 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CishQ62225 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CishQ62225 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CishQ62225 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
CishQ62225 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.05■□□□□ 0.48
CishQ62225 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CishQ62225 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CishQ62225 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CishQ62225 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CishQ62225 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CishQ62225 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CishQ62225 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CishQ62225 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CishQ62225 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CishQ62225 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.04■□□□□ 0.48
CishQ62225 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.04■□□□□ 0.48
CishQ62225 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.04■□□□□ 0.48
CishQ62225 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CishQ62225 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CishQ62225 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CishQ62225 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CishQ62225 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CishQ62225 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CishQ62225 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.04■□□□□ 0.48
CishQ62225 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CishQ62225 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CishQ62225 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CishQ62225 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.03■□□□□ 0.48
CishQ62225 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
CishQ62225 Gm7291-201ENSMUST00000199147 382 ntBASIC18.03■□□□□ 0.48
CishQ62225 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CishQ62225 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CishQ62225 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.03■□□□□ 0.48
CishQ62225 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CishQ62225 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CishQ62225 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CishQ62225 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.03■□□□□ 0.48
CishQ62225 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CishQ62225 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CishQ62225 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CishQ62225 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CishQ62225 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CishQ62225 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.02■□□□□ 0.48
CishQ62225 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.02■□□□□ 0.48
CishQ62225 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CishQ62225 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.02■□□□□ 0.48
CishQ62225 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CishQ62225 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CishQ62225 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
CishQ62225 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CishQ62225 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CishQ62225 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CishQ62225 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
CishQ62225 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CishQ62225 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.47
CishQ62225 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
CishQ62225 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CishQ62225 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CishQ62225 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CishQ62225 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CishQ62225 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CishQ62225 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms