Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Slc6a4Q60857 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Slc6a4Q60857 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Slc6a4Q60857 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Slc6a4Q60857 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.48■□□□□ 0.71
Slc6a4Q60857 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.48■□□□□ 0.71
Slc6a4Q60857 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Slc6a4Q60857 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Slc6a4Q60857 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Slc6a4Q60857 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Slc6a4Q60857 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Slc6a4Q60857 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Slc6a4Q60857 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Slc6a4Q60857 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Slc6a4Q60857 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc6a4Q60857 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.47■□□□□ 0.71
Slc6a4Q60857 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc6a4Q60857 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.47■□□□□ 0.71
Slc6a4Q60857 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.47■□□□□ 0.71
Slc6a4Q60857 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.47■□□□□ 0.71
Slc6a4Q60857 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc6a4Q60857 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc6a4Q60857 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc6a4Q60857 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc6a4Q60857 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
Slc6a4Q60857 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc6a4Q60857 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Slc6a4Q60857 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Slc6a4Q60857 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc6a4Q60857 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc6a4Q60857 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Slc6a4Q60857 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Slc6a4Q60857 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Slc6a4Q60857 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
Slc6a4Q60857 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Slc6a4Q60857 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Slc6a4Q60857 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc6a4Q60857 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.45■□□□□ 0.7
Slc6a4Q60857 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slc6a4Q60857 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slc6a4Q60857 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.45■□□□□ 0.7
Slc6a4Q60857 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
Slc6a4Q60857 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slc6a4Q60857 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Slc6a4Q60857 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc6a4Q60857 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
Slc6a4Q60857 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc6a4Q60857 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc6a4Q60857 Gm7290-201ENSMUST00000104990 617 ntBASIC19.44■□□□□ 0.7
Slc6a4Q60857 Gm12918-201ENSMUST00000120234 636 ntBASIC19.44■□□□□ 0.7
Slc6a4Q60857 Gm15710-201ENSMUST00000121821 636 ntBASIC19.44■□□□□ 0.7
Slc6a4Q60857 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.44■□□□□ 0.7
Slc6a4Q60857 Gm5075-201ENSMUST00000196916 622 ntBASIC19.44■□□□□ 0.7
Slc6a4Q60857 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Slc6a4Q60857 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.44■□□□□ 0.7
Slc6a4Q60857 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.44■□□□□ 0.7
Slc6a4Q60857 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.44■□□□□ 0.7
Slc6a4Q60857 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Slc6a4Q60857 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc6a4Q60857 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc6a4Q60857 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Slc6a4Q60857 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.43■□□□□ 0.7
Slc6a4Q60857 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Slc6a4Q60857 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.43■□□□□ 0.7
Slc6a4Q60857 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.43■□□□□ 0.7
Slc6a4Q60857 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc6a4Q60857 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Slc6a4Q60857 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc6a4Q60857 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc6a4Q60857 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Slc6a4Q60857 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Slc6a4Q60857 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc6a4Q60857 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc6a4Q60857 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Slc6a4Q60857 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Slc6a4Q60857 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc6a4Q60857 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Slc6a4Q60857 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Slc6a4Q60857 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Slc6a4Q60857 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc6a4Q60857 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Slc6a4Q60857 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc6a4Q60857 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.42■□□□□ 0.7
Slc6a4Q60857 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc6a4Q60857 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc6a4Q60857 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Slc6a4Q60857 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.41■□□□□ 0.7
Slc6a4Q60857 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc6a4Q60857 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc6a4Q60857 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc6a4Q60857 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Slc6a4Q60857 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc6a4Q60857 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Slc6a4Q60857 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.41■□□□□ 0.7
Slc6a4Q60857 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc6a4Q60857 Gm6211-202ENSMUST00000167849 925 ntBASIC19.41■□□□□ 0.7
Slc6a4Q60857 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc6a4Q60857 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.41■□□□□ 0.7
Slc6a4Q60857 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc6a4Q60857 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms