Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav2Q5R1I9 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav2Q5R1I9 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav2Q5R1I9 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav2Q5R1I9 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC15.09■□□□□ 0.01
Trav2Q5R1I9 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trav2Q5R1I9 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC15.09■□□□□ 0.01
Trav2Q5R1I9 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav2Q5R1I9 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC15.09■□□□□ 0.01
Trav2Q5R1I9 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC15.09■□□□□ 0.01
Trav2Q5R1I9 Gm27032-201ENSMUST00000183124 1116 ntBASIC15.09■□□□□ 0.01
Trav2Q5R1I9 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav2Q5R1I9 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav2Q5R1I9 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav2Q5R1I9 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav2Q5R1I9 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC15.08■□□□□ 0.01
Trav2Q5R1I9 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav2Q5R1I9 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC15.08■□□□□ 0
Trav2Q5R1I9 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
Trav2Q5R1I9 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC15.08■□□□□ 0
Trav2Q5R1I9 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav2Q5R1I9 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trav2Q5R1I9 Gm10655-201ENSMUST00000098658 1397 ntBASIC15.08■□□□□ 0
Trav2Q5R1I9 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav2Q5R1I9 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav2Q5R1I9 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav2Q5R1I9 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Trav2Q5R1I9 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav2Q5R1I9 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav2Q5R1I9 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav2Q5R1I9 Gm7290-201ENSMUST00000104990 617 ntBASIC15.07■□□□□ 0
Trav2Q5R1I9 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav2Q5R1I9 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav2Q5R1I9 Gm12918-201ENSMUST00000120234 636 ntBASIC15.07■□□□□ 0
Trav2Q5R1I9 Gm15710-201ENSMUST00000121821 636 ntBASIC15.07■□□□□ 0
Trav2Q5R1I9 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC15.07■□□□□ 0
Trav2Q5R1I9 Gm5075-201ENSMUST00000196916 622 ntBASIC15.07■□□□□ 0
Trav2Q5R1I9 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC15.07■□□□□ 0
Trav2Q5R1I9 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC15.07■□□□□ 0
Trav2Q5R1I9 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav2Q5R1I9 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav2Q5R1I9 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.07■□□□□ 0
Trav2Q5R1I9 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trav2Q5R1I9 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav2Q5R1I9 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav2Q5R1I9 Gm20100-201ENSMUST00000209418 2272 ntBASIC15.06■□□□□ 0
Trav2Q5R1I9 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav2Q5R1I9 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Trav2Q5R1I9 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav2Q5R1I9 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav2Q5R1I9 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav2Q5R1I9 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav2Q5R1I9 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav2Q5R1I9 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC15.06■□□□□ 0
Trav2Q5R1I9 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav2Q5R1I9 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC15.06■□□□□ 0
Trav2Q5R1I9 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Trav2Q5R1I9 Gm6420-201ENSMUST00000193885 723 ntBASIC15.06■□□□□ 0
Trav2Q5R1I9 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC15.06■□□□□ 0
Trav2Q5R1I9 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Trav2Q5R1I9 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC15.06■□□□□ 0
Trav2Q5R1I9 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav2Q5R1I9 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC15.06■□□□□ 0
Trav2Q5R1I9 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav2Q5R1I9 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Trav2Q5R1I9 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav2Q5R1I9 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav2Q5R1I9 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav2Q5R1I9 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav2Q5R1I9 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Trav2Q5R1I9 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC15.05■□□□□ 0
Trav2Q5R1I9 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC15.05■□□□□ -0
Trav2Q5R1I9 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Trav2Q5R1I9 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Trav2Q5R1I9 Nespas-201ENSMUST00000143738 1083 ntBASIC15.05■□□□□ -0
Trav2Q5R1I9 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav2Q5R1I9 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC15.05■□□□□ -0
Trav2Q5R1I9 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav2Q5R1I9 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC15.05■□□□□ -0
Trav2Q5R1I9 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Trav2Q5R1I9 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
Trav2Q5R1I9 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav2Q5R1I9 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC15.04■□□□□ -0
Trav2Q5R1I9 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC15.04■□□□□ -0
Trav2Q5R1I9 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Trav2Q5R1I9 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
Trav2Q5R1I9 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav2Q5R1I9 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav2Q5R1I9 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC15.04■□□□□ -0
Trav2Q5R1I9 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav2Q5R1I9 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav2Q5R1I9 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC15.04■□□□□ -0
Trav2Q5R1I9 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC15.04■□□□□ -0
Trav2Q5R1I9 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav2Q5R1I9 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav2Q5R1I9 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Trav2Q5R1I9 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav2Q5R1I9 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Trav2Q5R1I9 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Trav2Q5R1I9 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms