Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav7d-4Q5R1H9 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav7d-4Q5R1H9 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav7d-4Q5R1H9 Gm42922-201ENSMUST00000195887 2078 ntBASIC14.5□□□□□ -0.09
Trav7d-4Q5R1H9 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav7d-4Q5R1H9 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.49□□□□□ -0.09
Trav7d-4Q5R1H9 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav7d-4Q5R1H9 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav7d-4Q5R1H9 Gm43702-201ENSMUST00000198772 2546 ntBASIC14.49□□□□□ -0.09
Trav7d-4Q5R1H9 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav7d-4Q5R1H9 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trav7d-4Q5R1H9 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav7d-4Q5R1H9 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav7d-4Q5R1H9 Gm14523-201ENSMUST00000117260 558 ntBASIC14.49□□□□□ -0.09
Trav7d-4Q5R1H9 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC14.49□□□□□ -0.09
Trav7d-4Q5R1H9 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav7d-4Q5R1H9 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav7d-4Q5R1H9 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav7d-4Q5R1H9 Gm15853-202ENSMUST00000195518 2041 ntBASIC14.49□□□□□ -0.09
Trav7d-4Q5R1H9 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Trav7d-4Q5R1H9 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav7d-4Q5R1H9 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC14.48□□□□□ -0.09
Trav7d-4Q5R1H9 AC123834.2-201ENSMUST00000224038 2340 ntBASIC14.48□□□□□ -0.09
Trav7d-4Q5R1H9 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC14.48□□□□□ -0.09
Trav7d-4Q5R1H9 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav7d-4Q5R1H9 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trav7d-4Q5R1H9 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav7d-4Q5R1H9 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav7d-4Q5R1H9 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav7d-4Q5R1H9 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC14.48□□□□□ -0.09
Trav7d-4Q5R1H9 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC14.48□□□□□ -0.09
Trav7d-4Q5R1H9 Gm7143-201ENSMUST00000222811 859 ntBASIC14.48□□□□□ -0.09
Trav7d-4Q5R1H9 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav7d-4Q5R1H9 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav7d-4Q5R1H9 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav7d-4Q5R1H9 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav7d-4Q5R1H9 Gm37352-201ENSMUST00000193908 2181 ntBASIC14.48□□□□□ -0.09
Trav7d-4Q5R1H9 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC14.48□□□□□ -0.09
Trav7d-4Q5R1H9 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav7d-4Q5R1H9 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav7d-4Q5R1H9 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav7d-4Q5R1H9 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav7d-4Q5R1H9 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav7d-4Q5R1H9 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav7d-4Q5R1H9 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC14.47□□□□□ -0.09
Trav7d-4Q5R1H9 Gm27502-201ENSMUST00000183495 199 ntBASIC14.47□□□□□ -0.09
Trav7d-4Q5R1H9 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC14.47□□□□□ -0.09
Trav7d-4Q5R1H9 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC14.47□□□□□ -0.09
Trav7d-4Q5R1H9 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC14.47□□□□□ -0.09
Trav7d-4Q5R1H9 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav7d-4Q5R1H9 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav7d-4Q5R1H9 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav7d-4Q5R1H9 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav7d-4Q5R1H9 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trav7d-4Q5R1H9 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav7d-4Q5R1H9 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Trav7d-4Q5R1H9 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav7d-4Q5R1H9 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Trav7d-4Q5R1H9 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav7d-4Q5R1H9 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav7d-4Q5R1H9 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav7d-4Q5R1H9 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Trav7d-4Q5R1H9 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav7d-4Q5R1H9 AA386476-201ENSMUST00000098781 1665 ntBASIC14.46□□□□□ -0.1
Trav7d-4Q5R1H9 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC14.45□□□□□ -0.1
Trav7d-4Q5R1H9 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav7d-4Q5R1H9 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav7d-4Q5R1H9 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav7d-4Q5R1H9 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trav7d-4Q5R1H9 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav7d-4Q5R1H9 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC14.45□□□□□ -0.1
Trav7d-4Q5R1H9 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC14.45□□□□□ -0.1
Trav7d-4Q5R1H9 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav7d-4Q5R1H9 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trav7d-4Q5R1H9 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav7d-4Q5R1H9 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trav7d-4Q5R1H9 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
Trav7d-4Q5R1H9 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav7d-4Q5R1H9 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Trav7d-4Q5R1H9 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav7d-4Q5R1H9 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav7d-4Q5R1H9 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav7d-4Q5R1H9 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav7d-4Q5R1H9 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trav7d-4Q5R1H9 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC14.44□□□□□ -0.1
Trav7d-4Q5R1H9 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav7d-4Q5R1H9 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav7d-4Q5R1H9 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav7d-4Q5R1H9 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav7d-4Q5R1H9 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav7d-4Q5R1H9 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav7d-4Q5R1H9 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav7d-4Q5R1H9 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav7d-4Q5R1H9 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav7d-4Q5R1H9 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav7d-4Q5R1H9 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav7d-4Q5R1H9 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Trav7d-4Q5R1H9 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav7d-4Q5R1H9 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav7d-4Q5R1H9 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms