Protein–RNA interactions for Protein: Q5M6W3

Clhc1, Clathrin heavy chain linker domain-containing protein 1, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clhc1Q5M6W3 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clhc1Q5M6W3 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.26■□□□□ 0.51
Clhc1Q5M6W3 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Clhc1Q5M6W3 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clhc1Q5M6W3 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clhc1Q5M6W3 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clhc1Q5M6W3 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clhc1Q5M6W3 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Clhc1Q5M6W3 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clhc1Q5M6W3 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clhc1Q5M6W3 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Clhc1Q5M6W3 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Clhc1Q5M6W3 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Clhc1Q5M6W3 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
Clhc1Q5M6W3 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Clhc1Q5M6W3 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Clhc1Q5M6W3 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Clhc1Q5M6W3 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Clhc1Q5M6W3 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.25■□□□□ 0.51
Clhc1Q5M6W3 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.25■□□□□ 0.51
Clhc1Q5M6W3 Gm43530-201ENSMUST00000195920 274 ntBASIC18.25■□□□□ 0.51
Clhc1Q5M6W3 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Clhc1Q5M6W3 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Clhc1Q5M6W3 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Clhc1Q5M6W3 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Clhc1Q5M6W3 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Clhc1Q5M6W3 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Clhc1Q5M6W3 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Clhc1Q5M6W3 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Clhc1Q5M6W3 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Clhc1Q5M6W3 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.24■□□□□ 0.51
Clhc1Q5M6W3 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Clhc1Q5M6W3 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Clhc1Q5M6W3 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.24■□□□□ 0.51
Clhc1Q5M6W3 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.24■□□□□ 0.51
Clhc1Q5M6W3 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Clhc1Q5M6W3 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Clhc1Q5M6W3 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Clhc1Q5M6W3 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clhc1Q5M6W3 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clhc1Q5M6W3 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clhc1Q5M6W3 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clhc1Q5M6W3 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
Clhc1Q5M6W3 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.23■□□□□ 0.51
Clhc1Q5M6W3 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clhc1Q5M6W3 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.23■□□□□ 0.51
Clhc1Q5M6W3 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clhc1Q5M6W3 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.23■□□□□ 0.51
Clhc1Q5M6W3 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Clhc1Q5M6W3 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.23■□□□□ 0.51
Clhc1Q5M6W3 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clhc1Q5M6W3 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clhc1Q5M6W3 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
Clhc1Q5M6W3 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clhc1Q5M6W3 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clhc1Q5M6W3 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clhc1Q5M6W3 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clhc1Q5M6W3 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clhc1Q5M6W3 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clhc1Q5M6W3 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.22■□□□□ 0.51
Clhc1Q5M6W3 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clhc1Q5M6W3 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Clhc1Q5M6W3 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clhc1Q5M6W3 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Clhc1Q5M6W3 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Clhc1Q5M6W3 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.22■□□□□ 0.51
Clhc1Q5M6W3 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clhc1Q5M6W3 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.22■□□□□ 0.51
Clhc1Q5M6W3 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.22■□□□□ 0.51
Clhc1Q5M6W3 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clhc1Q5M6W3 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Clhc1Q5M6W3 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clhc1Q5M6W3 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.22■□□□□ 0.51
Clhc1Q5M6W3 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clhc1Q5M6W3 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.22■□□□□ 0.51
Clhc1Q5M6W3 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clhc1Q5M6W3 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clhc1Q5M6W3 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.22■□□□□ 0.51
Clhc1Q5M6W3 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.22■□□□□ 0.51
Clhc1Q5M6W3 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clhc1Q5M6W3 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clhc1Q5M6W3 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clhc1Q5M6W3 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Clhc1Q5M6W3 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.21■□□□□ 0.51
Clhc1Q5M6W3 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Clhc1Q5M6W3 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Clhc1Q5M6W3 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Clhc1Q5M6W3 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Clhc1Q5M6W3 Gm12922-201ENSMUST00000120626 809 ntBASIC18.21■□□□□ 0.51
Clhc1Q5M6W3 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.21■□□□□ 0.51
Clhc1Q5M6W3 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Clhc1Q5M6W3 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Clhc1Q5M6W3 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Clhc1Q5M6W3 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Clhc1Q5M6W3 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Clhc1Q5M6W3 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Clhc1Q5M6W3 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Clhc1Q5M6W3 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clhc1Q5M6W3 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Clhc1Q5M6W3 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms