Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Scn2bQ56A07 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scn2bQ56A07 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scn2bQ56A07 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scn2bQ56A07 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scn2bQ56A07 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scn2bQ56A07 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Scn2bQ56A07 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scn2bQ56A07 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scn2bQ56A07 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.75■□□□□ 0.59
Scn2bQ56A07 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.75■□□□□ 0.59
Scn2bQ56A07 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scn2bQ56A07 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Scn2bQ56A07 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scn2bQ56A07 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scn2bQ56A07 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
Scn2bQ56A07 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scn2bQ56A07 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Scn2bQ56A07 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Scn2bQ56A07 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.74■□□□□ 0.59
Scn2bQ56A07 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scn2bQ56A07 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scn2bQ56A07 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Scn2bQ56A07 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scn2bQ56A07 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scn2bQ56A07 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Scn2bQ56A07 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.74■□□□□ 0.59
Scn2bQ56A07 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scn2bQ56A07 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Scn2bQ56A07 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scn2bQ56A07 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Scn2bQ56A07 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.74■□□□□ 0.59
Scn2bQ56A07 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scn2bQ56A07 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scn2bQ56A07 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scn2bQ56A07 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scn2bQ56A07 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scn2bQ56A07 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scn2bQ56A07 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scn2bQ56A07 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scn2bQ56A07 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scn2bQ56A07 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scn2bQ56A07 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scn2bQ56A07 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.73■□□□□ 0.59
Scn2bQ56A07 Gm8493-201ENSMUST00000196881 489 ntBASIC18.73■□□□□ 0.59
Scn2bQ56A07 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scn2bQ56A07 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scn2bQ56A07 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Scn2bQ56A07 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scn2bQ56A07 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.72■□□□□ 0.59
Scn2bQ56A07 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scn2bQ56A07 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Scn2bQ56A07 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
Scn2bQ56A07 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scn2bQ56A07 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scn2bQ56A07 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scn2bQ56A07 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scn2bQ56A07 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scn2bQ56A07 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scn2bQ56A07 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scn2bQ56A07 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Scn2bQ56A07 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scn2bQ56A07 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.71■□□□□ 0.59
Scn2bQ56A07 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scn2bQ56A07 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scn2bQ56A07 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.71■□□□□ 0.59
Scn2bQ56A07 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.71■□□□□ 0.59
Scn2bQ56A07 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Scn2bQ56A07 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scn2bQ56A07 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
Scn2bQ56A07 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scn2bQ56A07 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scn2bQ56A07 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn2bQ56A07 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn2bQ56A07 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn2bQ56A07 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Scn2bQ56A07 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.7■□□□□ 0.58
Scn2bQ56A07 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn2bQ56A07 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.7■□□□□ 0.58
Scn2bQ56A07 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.7■□□□□ 0.58
Scn2bQ56A07 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn2bQ56A07 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
Scn2bQ56A07 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn2bQ56A07 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn2bQ56A07 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Scn2bQ56A07 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn2bQ56A07 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn2bQ56A07 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn2bQ56A07 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn2bQ56A07 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Scn2bQ56A07 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Scn2bQ56A07 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn2bQ56A07 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Scn2bQ56A07 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.69■□□□□ 0.58
Scn2bQ56A07 Spcs1-204ENSMUST00000226782 949 ntBASIC18.69■□□□□ 0.58
Scn2bQ56A07 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.69■□□□□ 0.58
Scn2bQ56A07 Gm6139-201ENSMUST00000079261 882 ntBASIC18.69■□□□□ 0.58
Scn2bQ56A07 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Scn2bQ56A07 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scn2bQ56A07 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms