Protein–RNA interactions for Protein: Q52KF3

Spire1, Protein spire homolog 1, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spire1Q52KF3 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.41■□□□□ 0.7
Spire1Q52KF3 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
Spire1Q52KF3 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.41■□□□□ 0.7
Spire1Q52KF3 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Spire1Q52KF3 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Spire1Q52KF3 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Spire1Q52KF3 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Spire1Q52KF3 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.4■□□□□ 0.7
Spire1Q52KF3 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Spire1Q52KF3 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Spire1Q52KF3 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Spire1Q52KF3 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.4■□□□□ 0.7
Spire1Q52KF3 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.39■□□□□ 0.7
Spire1Q52KF3 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Spire1Q52KF3 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Spire1Q52KF3 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Spire1Q52KF3 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Spire1Q52KF3 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Spire1Q52KF3 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Spire1Q52KF3 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.39■□□□□ 0.69
Spire1Q52KF3 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Spire1Q52KF3 Gm10812-201ENSMUST00000099864 546 ntBASIC19.39■□□□□ 0.69
Spire1Q52KF3 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Spire1Q52KF3 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Spire1Q52KF3 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Spire1Q52KF3 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Spire1Q52KF3 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
Spire1Q52KF3 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Spire1Q52KF3 Gm10252-201ENSMUST00000209541 832 ntBASIC19.38■□□□□ 0.69
Spire1Q52KF3 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Spire1Q52KF3 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Spire1Q52KF3 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Spire1Q52KF3 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Spire1Q52KF3 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Spire1Q52KF3 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Spire1Q52KF3 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Spire1Q52KF3 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Spire1Q52KF3 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.37■□□□□ 0.69
Spire1Q52KF3 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Spire1Q52KF3 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Spire1Q52KF3 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Spire1Q52KF3 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Spire1Q52KF3 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Spire1Q52KF3 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.36■□□□□ 0.69
Spire1Q52KF3 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Spire1Q52KF3 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Spire1Q52KF3 Gm12896-201ENSMUST00000118430 226 ntBASIC19.36■□□□□ 0.69
Spire1Q52KF3 Gm2559-201ENSMUST00000201323 363 ntBASIC19.36■□□□□ 0.69
Spire1Q52KF3 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.36■□□□□ 0.69
Spire1Q52KF3 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.36■□□□□ 0.69
Spire1Q52KF3 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Spire1Q52KF3 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Spire1Q52KF3 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Spire1Q52KF3 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Spire1Q52KF3 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
Spire1Q52KF3 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Spire1Q52KF3 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.35■□□□□ 0.69
Spire1Q52KF3 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Spire1Q52KF3 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Spire1Q52KF3 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Spire1Q52KF3 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Spire1Q52KF3 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC19.35■□□□□ 0.69
Spire1Q52KF3 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Spire1Q52KF3 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.35■□□□□ 0.69
Spire1Q52KF3 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Spire1Q52KF3 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Spire1Q52KF3 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Spire1Q52KF3 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Spire1Q52KF3 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Spire1Q52KF3 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Spire1Q52KF3 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Spire1Q52KF3 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Spire1Q52KF3 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Spire1Q52KF3 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Spire1Q52KF3 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Spire1Q52KF3 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.34■□□□□ 0.69
Spire1Q52KF3 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Spire1Q52KF3 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.34■□□□□ 0.69
Spire1Q52KF3 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.34■□□□□ 0.69
Spire1Q52KF3 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.34■□□□□ 0.69
Spire1Q52KF3 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Spire1Q52KF3 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Spire1Q52KF3 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Spire1Q52KF3 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Spire1Q52KF3 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Spire1Q52KF3 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Spire1Q52KF3 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Spire1Q52KF3 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.34■□□□□ 0.69
Spire1Q52KF3 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Spire1Q52KF3 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Spire1Q52KF3 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Spire1Q52KF3 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Spire1Q52KF3 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Spire1Q52KF3 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Spire1Q52KF3 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
Spire1Q52KF3 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Spire1Q52KF3 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Spire1Q52KF3 Gm27275-201ENSMUST00000184318 272 ntBASIC19.33■□□□□ 0.68
Spire1Q52KF3 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.33■□□□□ 0.68
Spire1Q52KF3 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms